RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 RFC1P35251 1148 aaPredicted RBP20.47■□□□□ 0.87
C2CD3-205ENST00000415191 LAMTOR4Q0VGL1 99 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 DNAJC3Q13217 504 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 CCDC142Q17RM4 750 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 DENND1BQ6P3S1 775 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 ECHDC2Q86YB7 292 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 ANKMY2Q8IV38 441 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 SLC35B2Q8TB61 432 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 SPOCK2Q92563 424 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 GRAMD1AQ96CP6 724 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 SMC6Q96SB8 1091 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 PCDHGC3Q9UN70 934 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 AFG3L2Q9Y4W6 797 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 CD19P15391 556 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 ASPAP45381 313 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 OSTNP61366 133 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 RIPK1Q13546 671 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 PTPN20Q4JDL3 420 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 KCNT1Q5JUK3 1230 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 RNF43Q68DV7 783 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 LRRC71Q8N4P6 559 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 DENND1AQ8TEH3 1009 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 THOC1Q96FV9 657 aaKnown RBP20.47■□□□□ 0.87
C2CD3-205ENST00000415191 MAF1Q9H063 256 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 NXF1Q9UBU9 619 aaKnown RBP20.47■□□□□ 0.87
C2CD3-205ENST00000415191 TJP2Q9UDY2 1190 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 CPSF3Q9UKF6 684 aaKnown RBP20.47■□□□□ 0.87
C2CD3-205ENST00000415191 LOC285556D6RIA3 1793 aa20.47■□□□□ 0.87
C2CD3-205ENST00000415191 C3orf70A6NLC5 250 aaPredicted RBP20.46■□□□□ 0.87
C2CD3-205ENST00000415191 PRPF4O43172 522 aaKnown RBP eCLIP20.46■□□□□ 0.87
C2CD3-205ENST00000415191 HOXC6P09630 235 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 LACTBP83111 547 aaPredicted RBP20.46■□□□□ 0.87
C2CD3-205ENST00000415191 SPARCL1Q14515 664 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 ZNF268Q14587 947 aaPredicted RBP20.46■□□□□ 0.87
C2CD3-205ENST00000415191 MAPK6Q16659 721 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 THNSL1Q8IYQ7 743 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 ACTL9Q8TC94 416 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 KRT3P12035 628 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 OTUD4Q01804 1114 aaKnown RBP20.46■□□□□ 0.87
C2CD3-205ENST00000415191 GAD2Q05329 585 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 NEDD9Q14511 834 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 HIF1AQ16665 826 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 APOBEC3FQ8IUX4 373 aaKnown RBP20.46■□□□□ 0.87
C2CD3-205ENST00000415191 ZBTB8OSQ8IWT0 167 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 JOSD2Q8TAC2 188 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 SEPT1Q8WYJ6 367 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 ZNF668Q96K58 619 aaPredicted RBP20.46■□□□□ 0.87
C2CD3-205ENST00000415191 XYLT2Q9H1B5 865 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 STRIP2Q9ULQ0 834 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 POLIQ9UNA4 740 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 TRIM33Q9UPN9 1127 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 MGAMO43451 1857 aa20.46■□□□□ 0.87
C2CD3-205ENST00000415191 ABLIM1O14639 778 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 IL1R2P27930 398 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 RPA3P35244 121 aaPredicted RBP20.45■□□□□ 0.86
C2CD3-205ENST00000415191 CTCFP49711 727 aaPredicted RBP20.45■□□□□ 0.86
C2CD3-205ENST00000415191 GDF10P55107 478 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 IER5Q5VY09 327 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 CDCA2Q69YH5 1023 aaPredicted RBP20.45■□□□□ 0.86
C2CD3-205ENST00000415191 POLNQ7Z5Q5 900 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 TRIM50Q86XT4 487 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 TAB3Q8N5C8 712 aaPredicted RBP20.45■□□□□ 0.86
C2CD3-205ENST00000415191 ANKLE1Q8NAG6 615 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 SMG5Q9UPR3 1016 aaKnown RBP20.45■□□□□ 0.86
C2CD3-205ENST00000415191 CST8O60676 142 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 LRCH4O75427 683 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 KRT16P08779 473 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 CA4P22748 312 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 RAP1GAPP47736 663 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 SLC25A11Q02978 314 aaKnown RBP20.45■□□□□ 0.86
C2CD3-205ENST00000415191 ACVR2BQ13705 512 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 LY6KQ17RY6 165 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 ARFGAP1Q8N6T3 406 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 SLCO1B3Q9NPD5 702 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 SENP1Q9P0U3 644 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 CYTH4Q9UIA0 394 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 MCM8Q9UJA3 840 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 GRID1Q9ULK0 1009 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 PHTF1Q9UMS5 762 aa20.45■□□□□ 0.86
C2CD3-205ENST00000415191 A0A1W2PPM1 405 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 SOWAHBA6NEL2 793 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 POLR2BP30876 1174 aaKnown RBP20.44■□□□□ 0.86
C2CD3-205ENST00000415191 SURF1Q15526 300 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 TREML2Q5T2D2 321 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 CDR2LQ86X02 465 aaPredicted RBP20.44■□□□□ 0.86
C2CD3-205ENST00000415191 GPATCH11Q8N954 259 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 BTBD7Q9P203 1132 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 FARP1Q9Y4F1 1045 aaPredicted RBP20.44■□□□□ 0.86
C2CD3-205ENST00000415191 MAGEB2O15479 319 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 TNNC2P02585 160 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 GPX6P59796 221 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 PSMC1P62191 440 aaKnown RBP20.44■□□□□ 0.86
C2CD3-205ENST00000415191 YWHAEP62258 255 aaKnown RBP20.44■□□□□ 0.86
C2CD3-205ENST00000415191 ANKRD22Q5VYY1 191 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 METTL7BQ6UX53 244 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 CEP120Q8N960 986 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 ARHGEF3Q9NR81 526 aa20.44■□□□□ 0.86
C2CD3-205ENST00000415191 PSMC3IPQ9P2W1 217 aaPredicted RBP20.44■□□□□ 0.86
C2CD3-205ENST00000415191 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
C2CD3-205ENST00000415191 STK38LQ9Y2H1 464 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms