RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TBC1D29Q9UFV1 150 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 AMACRQ9UHK6 382 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 SLC13A4Q9UKG4 626 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 C15orf41Q9Y2V0 281 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 TEX51A0A1B0GUA7 166 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 GOLGA6L7A0A1B0GV03 622 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TARSL2A2RTX5 802 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 RGSL1A5PLK6 1076 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 PGPEP1LA6NFU8 196 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 ZSCAN5CA6NGD5 496 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 A6NLC8 198 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 A6NNZ2 444 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 MINDY4BA8MYZ0 360 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TISP43B9A030 160 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 B9A039 149 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TMEM232C9JQI7 657 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 STX16-NPEPL1H3BU86 382 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 FZD9O00144 591 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 RFXAPO00287 272 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TRAF5O00463 557 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 E2F3O00716 465 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 AP3D1O14617 1153 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TRDMT1O14717 391 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TPP1O14773 563 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 THAP12O43422 761 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 DOK2O60496 412 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 FMO6PO60774 539 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SMPD2O60906 423 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 ATP6V1G1O75348 118 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 NEBLO76041 1014 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 EFEMP2O95967 443 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 ZBED1O96006 694 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CHRNA1P02708 482 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 LTFP02788 710 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 HRGP04196 525 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SNRNP70P08621 437 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SNRPA1P09661 255 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 LTA4HP09960 611 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 FAM153BP0C7A2 387 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 DHRS4L1P0CG22 281 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SRGAP2CP0DJJ0 459 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CDK4P11802 303 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 ATP1A3P13637 1013 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 VAV1P15498 845 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CYP7A1P22680 504 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 MSNP26038 577 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 EEF1GP26641 437 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TRHRP34981 398 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 LIFRP42702 1097 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 RPP38P78345 283 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 NKX3-2P78367 333 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 GALNT1Q10472 559 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TRPC3Q13507 836 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CRY1Q16526 586 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 ERCC6LQ2NKX8 1250 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 Q4G0T1 1027 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 FNDC3BQ53EP0 1204 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 XKR3Q5GH77 459 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CNNM4Q6P4Q7 775 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 FBXL19Q6PCT2 694 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 IL27RAQ6UWB1 636 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 LMBR1LQ6UX01 489 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 B3GNT9Q6UX72 402 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 MEX3BQ6ZN04 569 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TTLL7Q6ZT98 887 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 MAMDC2Q7Z304 686 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SRGAP1Q7Z6B7 1085 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 DPP9Q86TI2 863 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CAND1Q86VP6 1230 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CREG2Q8IUH2 290 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CD302Q8IX05 232 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CNTROBQ8N137 903 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TMCO5AQ8N6Q1 288 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CCDC150Q8NCX0 1101 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 GMCL1P1Q8NEA9 526 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 LILRB4Q8NHJ6 448 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 AGR3Q8TD06 166 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 LEO1Q8WVC0 666 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 RNF141Q8WVD5 230 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 WASF1Q92558 559 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 HSPH1Q92598 858 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 ARHGAP45Q92619 1136 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SMARCE1Q969G3 411 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 LTV1Q96GA3 475 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SNF8Q96H20 258 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 VPS50Q96JG6 964 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CABS1Q96KC9 395 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 PPP1R13BQ96KQ4 1090 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 CNOT6LQ96LI5 555 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 KREMEN1Q96MU8 473 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TTC25Q96NG3 672 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 FNBP1Q96RU3 617 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 MPHOSPH9Q99550 1183 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 NUP88Q99567 741 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TXN2Q99757 166 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 HGH1Q9BTY7 390 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 MENTQ9BUN1 341 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 PHF20Q9BVI0 1012 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 NT5C1AQ9BXI3 368 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms