RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
NEDD1-202ENST00000411739 PABPC1LQ4VXU2 614 aaKnown RBP12.8□□□□□ -0.36
NEDD1-202ENST00000411739 POTEHQ6S545 545 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 IRF2BP1Q8IU81 584 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 RNF135Q8IUD6 432 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 FBXL13Q8NEE6 735 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 FAM200AQ8TCP9 573 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 MYLPFQ96A32 169 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 ZNF512Q96ME7 567 aaPredicted RBP12.8□□□□□ -0.36
NEDD1-202ENST00000411739 ARID3AQ99856 593 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 VRTNQ9H8Y1 702 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 METTL14Q9HCE5 456 aaKnown RBP12.8□□□□□ -0.36
NEDD1-202ENST00000411739 MUTYHQ9UIF7 546 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 PCDHB5Q9Y5E4 795 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 TNFRSF10AO00220 468 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 CLDN5O00501 218 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 MYL4P12829 197 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 ATF6P18850 670 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 HOXA9P31269 272 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 GTF2H1P32780 548 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 CCDC183Q5T5S1 534 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 C11orf57Q6ZUT1 292 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-202ENST00000411739 ACOT1Q86TX2 421 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 GPIHBP1Q8IV16 184 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 SCN4BQ8IWT1 228 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 RSAD2Q8WXG1 361 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 CNOT6LQ96LI5 555 aaKnown RBP12.79□□□□□ -0.36
NEDD1-202ENST00000411739 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 HAPLN1P10915 354 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-202ENST00000411739 PTPN2P17706 415 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 PTPN1P18031 435 aaKnown RBP12.79□□□□□ -0.36
NEDD1-202ENST00000411739 BDNFP23560 247 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 FMO5P49326 533 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 NDST1P52848 882 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 MCCD1P59942 119 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-202ENST00000411739 MTMR3Q13615 1198 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 FAM171BQ6P995 826 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 RBM43Q6ZSC3 357 aaKnown RBP12.79□□□□□ -0.36
NEDD1-202ENST00000411739 SPATA2LQ8IUW3 424 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-202ENST00000411739 TDRD5Q8NAT2 981 aaKnown RBP12.79□□□□□ -0.36
NEDD1-202ENST00000411739 PCED1BQ96HM7 432 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 TWNKQ96RR1 684 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
NEDD1-202ENST00000411739 NOTCH4Q99466 2003 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 STX10O60499 249 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 EPHB3P54753 998 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 KCNH2Q12809 1159 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 ZNF394Q53GI3 561 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 IQCEQ6IPM2 695 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 SASS6Q6UVJ0 657 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 DNAJB7Q7Z6W7 309 aaPredicted RBP12.78□□□□□ -0.36
NEDD1-202ENST00000411739 TRIM59Q8IWR1 403 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 EPHX3Q9H6B9 360 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 ZNF334Q9HCZ1 680 aaPredicted RBP12.78□□□□□ -0.36
NEDD1-202ENST00000411739 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
NEDD1-202ENST00000411739 MRPS23Q9Y3D9 190 aaKnown RBP12.78□□□□□ -0.36
NEDD1-202ENST00000411739 NR2E1Q9Y466 385 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 PAPLNO95428 1278 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 CEBPBP17676 345 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 CACNA2D1P54289 1103 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 ENPEPQ07075 957 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 NFE2Q16621 373 aaPredicted RBP12.78□□□□□ -0.36
NEDD1-202ENST00000411739 OTOP3Q7RTS5 596 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 ELMOD1Q8N336 334 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 C12orf29Q8N999 325 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 SPPL2BQ8TCT7 592 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 TAF4BQ92750 862 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 MAGED2Q9UNF1 606 aaPredicted RBP12.78□□□□□ -0.36
NEDD1-202ENST00000411739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.78□□□□□ -0.36
NEDD1-202ENST00000411739 MYO10Q9HD67 2058 aa12.78□□□□□ -0.36
NEDD1-202ENST00000411739 CCDC192P0DO97 292 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 P4HA1P13674 534 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 TUFMP49411 452 aaKnown RBP12.77□□□□□ -0.37
NEDD1-202ENST00000411739 WDR44Q5JSH3 913 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 CYP26C1Q6V0L0 522 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 B3GALNT2Q8NCR0 500 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 MYCBPAPQ8TBZ2 947 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 FGF13Q92913 245 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 ACSF2Q96CM8 615 aaPredicted RBP12.77□□□□□ -0.37
NEDD1-202ENST00000411739 CRACR2AQ9BSW2 395 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 B3GNT5Q9BYG0 378 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 BCO2Q9BYV7 579 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 ZNF518BQ9C0D4 1074 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 NIF3L1Q9GZT8 377 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 MAGEC2Q9UBF1 373 aaPredicted RBP12.77□□□□□ -0.37
NEDD1-202ENST00000411739 FGFR1OPO95684 399 aaKnown RBP12.77□□□□□ -0.37
NEDD1-202ENST00000411739 GNA14O95837 355 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 CCDC130P13994 396 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 APBA1Q02410 837 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 PLD1Q13393 1074 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 FOXR2Q6PJQ5 311 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 PDZD4Q76G19 769 aaPredicted RBP12.77□□□□□ -0.37
NEDD1-202ENST00000411739 SPATA18Q8TC71 538 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 KAT5Q92993 513 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.37
NEDD1-202ENST00000411739 ASAH2Q9NR71 780 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms