RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 HSP90AA4PQ58FG1 418 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 PPM1LQ5SGD2 360 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 GBP6Q6ZN66 633 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 EP400NLQ6ZTU2 488 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 C12orf76Q8N812 135 aaPredicted RBP15.77■□□□□ 0.12
SUMO1-207ENST00000409498 SLC7A14Q8TBB6 771 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 MYCBPAPQ8TBZ2 947 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 WHAMMQ8TF30 809 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 JAKMIP2Q96AA8 810 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 TNIP3Q96KP6 325 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 FAM81BQ96LP2 452 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 NT5C1BQ96P26 610 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 ASB2Q96Q27 587 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 CYP4F11Q9HBI6 524 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 GTF3C4Q9UKN8 822 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 PCDHB5Q9Y5E4 795 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 INSL5Q9Y5Q6 135 aa15.77■□□□□ 0.12
SUMO1-207ENST00000409498 PDGFRBP09619 1106 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 HAPLN1P10915 354 aaPredicted RBP15.76■□□□□ 0.11
SUMO1-207ENST00000409498 MTHFRP42898 656 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 NDST1P52848 882 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 DUSP4Q13115 394 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 EXOC3L4Q17RC7 722 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 PHLDB3Q6NSJ2 640 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 CES5AQ6NT32 575 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 DPY19L2P1Q6NXN4 242 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 TRIM65Q6PJ69 517 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 LRSAM1Q6UWE0 723 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 C4orf50Q6ZRC1 276 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 ATAD1Q8NBU5 361 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 B3GALNT2Q8NCR0 500 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 NECTIN4Q96NY8 510 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 PGLYRP2Q96PD5 576 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 INTS2Q9H0H0 1204 aaKnown RBP15.76■□□□□ 0.11
SUMO1-207ENST00000409498 CBX8Q9HC52 389 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 CISHQ9NSE2 258 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 GCNT4Q9P109 453 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 FAM50BQ9Y247 325 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 PTPRDP23468 1912 aa15.76■□□□□ 0.11
SUMO1-207ENST00000409498 C2orf16Q68DN1 1984 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 PRRG1O14668 218 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 ATP2C2O75185 946 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 BMP1P13497 986 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 SLC9A1P19634 815 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 PON1P27169 355 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 MAGEA11P43364 429 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 COPB1P53618 953 aaKnown RBP15.75■□□□□ 0.11
SUMO1-207ENST00000409498 ZNF445P59923 1031 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 YWHAEP62258 255 aaKnown RBP15.75■□□□□ 0.11
SUMO1-207ENST00000409498 KCNMA1Q12791 1236 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 PLD1Q13393 1074 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 ATAT1Q5SQI0 421 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 RARS2Q5T160 578 aaKnown RBP15.75■□□□□ 0.11
SUMO1-207ENST00000409498 PTCRAQ6ISU1 281 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-207ENST00000409498 VSTM1Q6UX27 236 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 TMC5Q6UXY8 1006 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.75■□□□□ 0.11
SUMO1-207ENST00000409498 ANKRD20A12PQ8NF67 263 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 PCED1BQ96HM7 432 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 CEP295NLQ96MC4 621 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 RIPOR3Q96MK2 946 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 TWNKQ96RR1 684 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 NT5C1AQ9BXI3 368 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 DPEP3Q9H4B8 488 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 AVENQ9NQS1 362 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-207ENST00000409498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.75■□□□□ 0.115e-8■■■■■ 101.2
SUMO1-207ENST00000409498 CNTN6Q9UQ52 1028 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 USP15Q9Y4E8 981 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-207ENST00000409498 YIPF1Q9Y548 306 aa15.75■□□□□ 0.11
SUMO1-207ENST00000409498 BECN2A8MW95 431 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 XYLBO75191 536 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 LRG1P02750 347 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 ACO1P21399 889 aaKnown RBP15.74■□□□□ 0.11
SUMO1-207ENST00000409498 PSMC1P62191 440 aaKnown RBP15.74■□□□□ 0.11
SUMO1-207ENST00000409498 CBX2Q14781 532 aaPredicted RBP15.74■□□□□ 0.11
SUMO1-207ENST00000409498 ENOSF1Q7L5Y1 443 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 ARHGEF19Q8IW93 802 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 FEZF2Q8TBJ5 459 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 FAM200AQ8TCP9 573 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 MYLPFQ96A32 169 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 ARID3AQ99856 593 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 ELOVL4Q9GZR5 314 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 DNAI2Q9GZS0 605 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 WDR6Q9NNW5 1121 aaKnown RBP15.74■□□□□ 0.11
SUMO1-207ENST00000409498 SIX2Q9NPC8 291 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 TAB2Q9NYJ8 693 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 APEX2Q9UBZ4 518 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 HMGXB4Q9UGU5 601 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 SLC27A5Q9Y2P5 690 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 ASB3Q9Y575 518 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 DENND4AQ7Z401 1863 aa15.74■□□□□ 0.11
SUMO1-207ENST00000409498 CLSTN1O94985 981 aa15.73■□□□□ 0.11
SUMO1-207ENST00000409498 TPM2P07951 284 aa15.73■□□□□ 0.11
SUMO1-207ENST00000409498 ATP1A3P13637 1013 aa15.73■□□□□ 0.11
SUMO1-207ENST00000409498 CDK11BP21127 795 aaKnown RBP15.73■□□□□ 0.11
SUMO1-207ENST00000409498 KCNQ1P51787 676 aa15.73■□□□□ 0.11
SUMO1-207ENST00000409498 RAD23BP54727 409 aa15.73■□□□□ 0.11
SUMO1-207ENST00000409498 EPHA5P54756 1037 aa15.73■□□□□ 0.11
SUMO1-207ENST00000409498 TWF1Q12792 350 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms