RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 HAUS1Q96CS2 278 aa16.52■□□□□ 0.24
TOM1-203ENST00000404284 C19orf81C9J6K1 198 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 IGF2BP3O00425 579 aaKnown RBP eCLIP16.52■□□□□ 0.23
TOM1-203ENST00000404284 ANP32DO95626 131 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 CDH5P33151 784 aaPredicted RBP16.52■□□□□ 0.23
TOM1-203ENST00000404284 GMPSP49915 693 aaPredicted RBP16.52■□□□□ 0.23
TOM1-203ENST00000404284 IL9RQ01113 521 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 NR1H3Q13133 447 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 ACVR2BQ13705 512 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 ZNF394Q53GI3 561 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 HP1BP3Q5SSJ5 553 aaPredicted RBP16.52■□□□□ 0.23
TOM1-203ENST00000404284 GPAT2Q6NUI2 795 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 DCUN1D2Q6PH85 259 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 ZPBP2Q6X784 338 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 NIPA2Q8N8Q9 360 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 NIF3L1Q9GZT8 377 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 UBN1Q9NPG3 1134 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 CISHQ9NSE2 258 aa16.52■□□□□ 0.23
TOM1-203ENST00000404284 PRPF4O43172 522 aaKnown RBP eCLIP16.51■□□□□ 0.23
TOM1-203ENST00000404284 SPAG7O75391 227 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 UBA1P22314 1058 aaKnown RBP16.51■□□□□ 0.23
TOM1-203ENST00000404284 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
TOM1-203ENST00000404284 AP3M2P53677 418 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 GRM1Q13255 1194 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 ECHDC2Q86YB7 292 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 TMEM35BQ8NCS4 154 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 TFAP2BQ92481 460 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 TMEM121Q9BTD3 319 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 SHOC2Q9UQ13 582 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 LRRD1A4D1F6 860 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 C3orf70A6NLC5 250 aaPredicted RBP16.51■□□□□ 0.23
TOM1-203ENST00000404284 MSCO60682 206 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 ITGAVP06756 1048 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 PIGHQ14442 188 aaPredicted RBP16.51■□□□□ 0.23
TOM1-203ENST00000404284 PKN2Q16513 984 aaKnown RBP16.51■□□□□ 0.23
TOM1-203ENST00000404284 FAM47EQ6ZV65 393 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 ASRGL1Q7L266 308 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 SLC35B2Q8TB61 432 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 PRCCQ92733 491 aaPredicted RBP16.51■□□□□ 0.23
TOM1-203ENST00000404284 GRAMD1AQ96CP6 724 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 FAM210AQ96ND0 272 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 EBF2Q9HAK2 575 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 PCDH9Q9HC56 1237 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 KLHL14Q9P2G3 628 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 C15orf41Q9Y2V0 281 aa16.51■□□□□ 0.23
TOM1-203ENST00000404284 POC1B-GALNT4F8VUJ3 575 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 NFKBIEO00221 500 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 ALOX15BO15296 676 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 MAGEB2O15479 319 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 SMNDC1O75940 238 aaKnown RBP eCLIP16.5■□□□□ 0.23
TOM1-203ENST00000404284 FARP2O94887 1054 aaPredicted RBP16.5■□□□□ 0.23
TOM1-203ENST00000404284 ALADP13716 330 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 CYP4A22Q5TCH4 519 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 ZBED8Q8IZ13 594 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 KLHL29Q96CT2 875 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 PITPNM3Q9BZ71 974 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 ZNF518BQ9C0D4 1074 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 MAF1Q9H063 256 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 TRABDQ9H4I3 376 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 ARHGEF3Q9NR81 526 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 DDX56Q9NY93 547 aaKnown RBP16.5■□□□□ 0.23
TOM1-203ENST00000404284 GRID1Q9ULK0 1009 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 PCDHGC3Q9UN70 934 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 ABLIM1O14639 778 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 TOM1L1O75674 476 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 SLC18A1P54219 525 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 TAP1Q03518 808 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 CAPN12Q6ZSI9 719 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 KIF2BQ8N4N8 673 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 SPOCK2Q92563 424 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 VPS37BQ9H9H4 285 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
TOM1-203ENST00000404284 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 KRT16P08779 473 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 EIF4BP23588 611 aaKnown RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 PSMC4P43686 418 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 CCDC15Q0P6D6 951 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 PRPF31Q8WWY3 499 aaKnown RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 PAIP2Q9BPZ3 127 aaKnown RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 FARP1Q9Y4F1 1045 aaPredicted RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 SGK1O00141 431 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 MAFO75444 373 aaPredicted RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 BANF1O75531 89 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 WEE2P0C1S8 567 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 CCNB1P14635 433 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 RXRBP28702 533 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 ASPAP45381 313 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 SLC25A11Q02978 314 aaKnown RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 SCARA5Q6ZMJ2 495 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 RGS9BPQ6ZS82 235 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 POLNQ7Z5Q5 900 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 ERICH1Q86X53 443 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 MRPL4Q9BYD3 311 aaKnown RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 TRIM33Q9UPN9 1127 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 WDR90Q96KV7 1748 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 IFNB1P01574 187 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 GPX6P59796 221 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 PDIA2Q13087 525 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms