RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SAMD3Q8N6K7 520 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 CGRRF1Q99675 332 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 DDIT4Q9NX09 232 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 ZNF263O14978 683 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 CYP2C8P10632 490 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 ACO1P21399 889 aaKnown RBP18.97■□□□□ 0.63
COL18A1-204ENST00000400337 THPOP40225 353 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 ERP27Q96DN0 273 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 OSGEPQ9NPF4 335 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 ANGPT2O15123 496 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 TWF1Q12792 350 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 C10orf120Q5SQS8 335 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 MROH9Q5TGP6 573 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 TTC39BQ5VTQ0 682 aaPredicted RBP18.97■□□□□ 0.63
COL18A1-204ENST00000400337 ICA1LQ8NDH6 482 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 STKLD1Q8NE28 680 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 HNRNPLLQ8WVV9 542 aaKnown RBP18.97■□□□□ 0.63
COL18A1-204ENST00000400337 SYCE1LA8MT33 242 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 ZC3H11AO75152 810 aaKnown RBP eCLIP18.97■□□□□ 0.636e-7■■■□□ 15.9
COL18A1-204ENST00000400337 MYL2P10916 166 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 CYP24A1Q07973 514 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 TRADDQ15628 312 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 MROH8Q9H579 483 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 DDX4Q9NQI0 724 aaKnown RBP18.97■□□□□ 0.63
COL18A1-204ENST00000400337 LATS2Q9NRM7 1088 aa18.97■□□□□ 0.63
COL18A1-204ENST00000400337 ADARB2Q9NS39 739 aaKnown RBP18.97■□□□□ 0.63
COL18A1-204ENST00000400337 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.97■□□□□ 0.63
COL18A1-204ENST00000400337 B3GAT3O94766 335 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 STAG3L1P0CL83 205 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 RRM1P23921 792 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 TMC2Q8TDI7 906 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 SLC20A1Q8WUM9 679 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 TFB1MQ8WVM0 346 aaKnown RBP18.96■□□□□ 0.63
COL18A1-204ENST00000400337 GLT1D1Q96MS3 346 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 IRAK1P51617 712 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 SLC47A2Q86VL8 602 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 CPB2Q96IY4 423 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 L3MBTL3Q96JM7 780 aaPredicted RBP18.96■□□□□ 0.63
COL18A1-204ENST00000400337 LBHD1Q9BQE6 289 aaPredicted RBP18.96■□□□□ 0.63
COL18A1-204ENST00000400337 HIST1H2AGP0C0S8 130 aaPredicted RBP18.96■□□□□ 0.63
COL18A1-204ENST00000400337 HIST1H2ADP20671 130 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 MFN1Q8IWA4 741 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 HIST1H2AHQ96KK5 128 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 HIST1H2AJQ99878 128 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 H2AFJQ9BTM1 129 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 BCL9O00512 1426 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 VDRP11473 427 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 AKT1P31749 480 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 STIP1P31948 543 aaKnown RBP18.96■□□□□ 0.63
COL18A1-204ENST00000400337 PLEKHH3Q7Z736 793 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 MDM1Q8TC05 714 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 ATP8B4Q8TF62 1192 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 PCDHGB4Q9UN71 923 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 AURKCQ9UQB9 309 aa18.96■□□□□ 0.63
COL18A1-204ENST00000400337 DCCP43146 1447 aa18.96■□□□□ 0.62
COL18A1-204ENST00000400337 MTSS1O43312 755 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 AP1G2O75843 785 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 ASMTLO95671 621 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 TMED1Q13445 227 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 RIBC1Q8N443 379 aaPredicted RBP18.95■□□□□ 0.62
COL18A1-204ENST00000400337 SLITRK1Q96PX8 696 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 CCDC90BQ9GZT6 254 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 OLFML3Q9NRN5 406 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 SPATA31D1Q6ZQQ2 1576 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 GZMAP12544 262 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 RAP1GAPP47736 663 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 SERPINB4P48594 390 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 GEMIN4P57678 1058 aaKnown RBP18.95■□□□□ 0.62
COL18A1-204ENST00000400337 PGM5Q15124 567 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 YAF2Q8IY57 180 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 RIMBP3CA6NJZ7 1639 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 RIMBP3BA6NNM3 1639 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 RIMBP3Q9UFD9 1639 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 SYNDIG1LA6NDD5 238 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 FAM86B1E9PN63 330 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 FAM86B2P0C5J1 330 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 ODC1P11926 461 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 LAMB3Q13751 1172 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 SV2AQ7L0J3 742 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 DNAAF5Q86Y56 855 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 CALML6Q8TD86 181 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 DTX3LQ8TDB6 740 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 STAMBPL1Q96FJ0 436 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 WDCPQ9H6R7 721 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 GRID1Q9ULK0 1009 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 YY1P25490 414 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 ST8SIA6P61647 398 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 NAPEPLDQ6IQ20 393 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 C4orf22Q6V702 233 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 SRLQ86TD4 932 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 FAM83AQ86UY5 434 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 TMA16Q96EY4 203 aaKnown RBP18.95■□□□□ 0.62
COL18A1-204ENST00000400337 KIF17Q9P2E2 1029 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 HNRNPCL1O60812 293 aaKnown RBP18.95■□□□□ 0.62
COL18A1-204ENST00000400337 RGS2P41220 211 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 MYL6P60660 151 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 CD302Q8IX05 232 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 PNMA5Q96PV4 448 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 SNX5Q9Y5X3 404 aa18.95■□□□□ 0.62
COL18A1-204ENST00000400337 ENO3P13929 434 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms