RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 MSL3Q8N5Y2 521 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 DEPDC7Q96QD5 511 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 TUFT1Q9NNX1 390 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 INTS9Q9NV88 658 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 A0A087X0T9 212 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 PCNAP12004 261 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 BTKQ06187 659 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 SYCP2LQ5T4T6 812 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ARHGEF38Q9NXL2 777 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 GALNT8Q9NY28 637 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ADGRB3O60242 1522 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 CDC42BPGQ6DT37 1551 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 TSPAN3O60637 253 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 KRT75O95678 551 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 FLT3P36888 993 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 IFT88Q13099 833 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 MAPRE1Q15691 268 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 KIFC3Q9BVG8 833 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 USP18Q9UMW8 372 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 POLR1DQ9Y2S0 133 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 DYRK1BQ9Y463 629 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ADGRB2O60241 1585 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ENO4A6NNW6 628 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 POMCP01189 267 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 TGM3Q08188 693 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 EMC2Q15006 297 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 DCAF6Q58WW2 860 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ZNF280DQ6N043 979 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 IQCF2Q8IXL9 164 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 RIN3Q8TB24 985 aa11.43□□□□□ -0.58
CACNA1C-216ENST00000399638 ADM5C9JUS6 153 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 VTNP04004 478 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 CENPCQ03188 943 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 XKR3Q5GH77 459 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 IYDQ6PHW0 289 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 VPS37AQ8NEZ2 397 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 FAM20AQ96MK3 541 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 SOX13Q9UN79 622 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 ABCA6Q8N139 1617 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 PSMD3O43242 534 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 PYGBP11216 843 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 TMPRSS15P98073 1019 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 MTFR1Q15390 333 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 SNX30Q5VWJ9 437 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 LAYNQ6UX15 382 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 FAM124AQ86V42 546 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 SUSD6Q92537 303 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 AGBL1Q96MI9 1066 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 VTI1BQ9UEU0 232 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 TUBE1Q9UJT0 475 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 TSC22D4Q9Y3Q8 395 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 CRB1P82279 1406 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 PGRMC1O00264 195 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 NR3C1P04150 777 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 SERPING1P05155 500 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 ZNF286BP0CG31 522 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 FAAH2Q6GMR7 532 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 LINC00116Q8NCU8 138 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 C18orf25Q96B23 403 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 KCNS3Q9BQ31 491 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 LIMA1Q9UHB6 759 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 SEC31AO94979 1220 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 GUCY2CP25092 1073 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 TAF6P49848 677 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 CSNK2BP67870 215 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 DSG4Q86SJ6 1040 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 ELOA2Q8IYF1 753 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 OSBPL6Q9BZF3 934 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 SPG21Q9NZD8 308 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 NDRG2Q9UN36 371 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 TMA7Q9Y2S6 64 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 KDM6AO15550 1401 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 SH2B2O14492 632 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 ACSL4O60488 711 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 GRAP2O75791 330 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 SUN1O94901 812 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 CCNE1P24864 410 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 HALP42357 657 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 PRKCEQ02156 737 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 TBC1D25Q3MII6 688 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 TRMT11Q7Z4G4 463 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 IPMKQ8NFU5 416 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 LCMT1Q9UIC8 334 aa11.42□□□□□ -0.58
CACNA1C-216ENST00000399638 MTA2O94776 668 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CYP19A1P11511 503 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 CXCR5P32302 372 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 NNTQ13423 1086 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 SYTL5Q8TDW5 730 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 ATG4CQ96DT6 458 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 ZC3H7BQ9UGR2 993 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 TMEM88BA6NKF7 163 aa11.41□□□□□ -0.58
CACNA1C-216ENST00000399638 EFEMP1Q12805 493 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms