RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 COPS2P61201 443 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 OGDHQ02218 1023 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 NFX1Q12986 1120 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 STILQ15468 1287 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 ZBTB6Q15916 424 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 LRRC52Q8N7C0 313 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 CPXM1Q96SM3 734 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 HERPUD2Q9BSE4 406 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 HEMGNQ9BXL5 484 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 TXLNGYQ9BZA5 131 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 CHST7Q9NS84 486 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 CNTN3Q9P232 1028 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 GAS8O95995 478 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 KRT1P04264 644 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 GABRB2P47870 512 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 KRT17Q04695 432 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 SNX1Q13596 522 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 CCNG2Q16589 344 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 ODF2Q5BJF6 829 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 CEP85LQ5SZL2 805 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 ZFYVE27Q5T4F4 411 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 XYLT1Q86Y38 959 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 FBXO25Q8TCJ0 367 aa27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 ZMAT2Q96NC0 199 aaKnown RBP27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 PIN4Q9Y237 131 aaKnown RBP27.2■■□□□ 1.95
SHARPIN-202ENST00000398712 PDCD11Q14690 1871 aaKnown RBP27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 H0YGN5 161 aa27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 CRYBB1P53674 252 aaPredicted RBP27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 ALKAL1Q6UXT8 129 aa27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 C7orf31Q8N865 590 aa27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 ATL2Q8NHH9 583 aa27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 SLITRK1Q96PX8 696 aa27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 TSPAN18Q96SJ8 248 aa27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 MIS12Q9H081 205 aa27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 NFS1Q9Y697 457 aa27.2■■□□□ 1.94
SHARPIN-202ENST00000398712 KPNA6O60684 536 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 RECQL4O94761 1208 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 ATF7P17544 494 aaPredicted RBP27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 PSMA2P25787 234 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 PURAQ00577 322 aaKnown RBP27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 CALCOCO2Q13137 446 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 CRHR2Q13324 411 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 PDCLQ13371 301 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 POLNQ7Z5Q5 900 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 IPO4Q8TEX9 1081 aaKnown RBP27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 ATG4AQ8WYN0 398 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 ART4Q93070 314 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 RNF25Q96BH1 459 aaPredicted RBP27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 NXF3Q9H4D5 531 aaKnown RBP27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 UBQLN1Q9UMX0 589 aaKnown RBP27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 ATP8A1Q9Y2Q0 1164 aa27.19■■□□□ 1.94
SHARPIN-202ENST00000398712 TRIP12Q14669 1992 aaPredicted RBP27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 ERBB2P04626 1255 aa27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 PTPN7P35236 360 aa27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 RFC1P35251 1148 aaPredicted RBP27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 GPD2P43304 727 aa27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 PTK6Q13882 451 aa27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 LCLAT1Q6UWP7 414 aa27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 WHRNQ9P202 907 aa27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 HES2Q9Y543 173 aa27.18■■□□□ 1.94
SHARPIN-202ENST00000398712 HMGB1P1B2RPK0 211 aaPredicted RBP27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 DUSP11O75319 330 aaKnown RBP27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 MYZAPP0CAP1 466 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 CAPN2P17655 700 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 HOXC8P31273 242 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 ZNF200P98182 395 aaPredicted RBP27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 TJP2Q9UDY2 1190 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 TUBGCP4Q9UGJ1 667 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 R3HDM2Q9Y2K5 976 aaKnown RBP27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 SNX9Q9Y5X1 595 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 KIF3CO14782 793 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 XPOTO43592 962 aaKnown RBP27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 TJP3O95049 919 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 CD4P01730 458 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 TCF4P15884 667 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 PMS2P54278 862 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 EIF3BP55884 814 aaKnown RBP27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 TMEM40Q8WWA1 233 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 MCRS1Q96EZ8 462 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 ATP6V1G3Q96LB4 118 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 CCDC114Q96M63 670 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 CXCL16Q9H2A7 254 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 TMBIM4Q9HC24 238 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 METTL5Q9NRN9 209 aaKnown RBP27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 ASIC3Q9UHC3 531 aa27.17■■□□□ 1.94
SHARPIN-202ENST00000398712 HADHQ16836 314 aaKnown RBP27.16■■□□□ 1.94
SHARPIN-202ENST00000398712 ATP13A4Q4VNC1 1196 aa27.16■■□□□ 1.94
SHARPIN-202ENST00000398712 SPOCD1Q6ZMY3 1216 aa27.16■■□□□ 1.94
SHARPIN-202ENST00000398712 DPH6Q7L8W6 267 aa27.16■■□□□ 1.94
SHARPIN-202ENST00000398712 JOSD2Q8TAC2 188 aa27.16■■□□□ 1.94
SHARPIN-202ENST00000398712 APOL6Q9BWW8 343 aa27.16■■□□□ 1.94
SHARPIN-202ENST00000398712 KLHL11Q9NVR0 708 aa27.16■■□□□ 1.94
SHARPIN-202ENST00000398712 SCN1AP35498 2009 aa27.15■■□□□ 1.94
SHARPIN-202ENST00000398712 FAM155AB1AL88 458 aaPredicted RBP27.15■■□□□ 1.94
SHARPIN-202ENST00000398712 KRT7P08729 469 aa27.15■■□□□ 1.94
SHARPIN-202ENST00000398712 ITIH2P19823 946 aa27.15■■□□□ 1.94
SHARPIN-202ENST00000398712 LMNB2Q03252 620 aa27.15■■□□□ 1.94
SHARPIN-202ENST00000398712 ZNF844Q08AG5 666 aa27.15■■□□□ 1.94
SHARPIN-202ENST00000398712 SLMAPQ14BN4 828 aa27.15■■□□□ 1.94
SHARPIN-202ENST00000398712 ACAP1Q15027 740 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms