RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.32□□□□□ -0.6
MSL3-207ENST00000398527 HEY1Q9Y5J3 304 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 E2F3O00716 465 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 SLC37A4O43826 429 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 ATP1A1P05023 1023 aaKnown RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 CCL5P13501 91 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 COL9A1P20849 921 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 TNFRSF8P28908 595 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 PSMC2P35998 433 aaKnown RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 CDKN1CP49918 316 aaPredicted RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 LACTBP83111 547 aaPredicted RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 DAB2P98082 770 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 PPP2R2DQ66LE6 453 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 PDE12Q6L8Q7 609 aaKnown RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 GALNT7Q86SF2 657 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 NOA1Q8NC60 698 aaKnown RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 DQX1Q8TE96 717 aaKnown RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 BAP1Q92560 729 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 BTBD6Q96KE9 485 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 NDNQ99608 321 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 AIFM2Q9BRQ8 373 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 CCDC106Q9BWC9 280 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 EHD2Q9NZN4 543 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 ZFATQ9P243 1243 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 ZNF624Q9P2J8 865 aaPredicted RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 VTI1BQ9UEU0 232 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 PARP2Q9UGN5 583 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 SNX12Q9UMY4 172 aa11.32□□□□□ -0.6
MSL3-207ENST00000398527 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
MSL3-207ENST00000398527 E9PMD0 336 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 DGKIO75912 1065 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 DNAJC8O75937 253 aaPredicted RBP11.31□□□□□ -0.6
MSL3-207ENST00000398527 SCGB1D2O95969 90 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 TKTP29401 623 aaKnown RBP11.31□□□□□ -0.6
MSL3-207ENST00000398527 CSTF2P33240 577 aaKnown RBP eCLIP11.31□□□□□ -0.6
MSL3-207ENST00000398527 ZNF76P36508 570 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 IREB2P48200 963 aaKnown RBP11.31□□□□□ -0.6
MSL3-207ENST00000398527 EDRF1Q3B7T1 1238 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 VPS36Q86VN1 386 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 ERICH1Q86X53 443 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 JAMLQ86YT9 394 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 BRI3BPQ8WY22 251 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 ACAP3Q96P50 834 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 PLIN2Q99541 437 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 LACRTQ9GZZ8 138 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 C8orf33Q9H7E9 229 aaPredicted RBP11.31□□□□□ -0.6
MSL3-207ENST00000398527 C12orf10Q9HB07 376 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 VAT1LQ9HCJ6 419 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 KCNMB3Q9NPA1 279 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 PCDHA13Q9Y5I0 950 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
MSL3-207ENST00000398527 RPTORQ8N122 1335 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 H3BQF6 201 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 SULT1B1O43704 296 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 MGRN1O60291 552 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 TDP2O95551 362 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 RHOXF2BP0C7M4 288 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 TMEM11P17152 192 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 SERPINB8P50452 374 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 SETMARQ53H47 684 aaPredicted RBP11.31□□□□□ -0.6
MSL3-207ENST00000398527 C6orf183Q5T699 404 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 CCDC13Q8IYE1 715 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 SLFN12Q8IYM2 578 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 OSCP1Q8WVF1 389 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 HAS1Q92839 578 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 RHOXF2Q9BQY4 288 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 ZPBPQ9BS86 351 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 CRLF2Q9HC73 371 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 PFDN4Q9NQP4 134 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 TMEM260Q9NX78 707 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 ARHGAP20Q9P2F6 1191 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 DPP7Q9UHL4 492 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 LNPEPQ9UIQ6 1025 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 MOSPD1Q9UJG1 213 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 ZNF112Q9UJU3 913 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 ASB3Q9Y575 518 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 OTOFQ9HC10 1997 aa11.31□□□□□ -0.6
MSL3-207ENST00000398527 BTNL10A8MVZ5 291 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 KRIT1O00522 736 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 EBAG9O00559 213 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 ZNF263O14978 683 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 TMEM127O75204 238 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 TIPRLO75663 272 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 RASSF9O75901 435 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 FGF18O76093 207 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 NPTXRO95502 500 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 GALNSP34059 522 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 KRT20P35900 424 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 AP3M2P53677 418 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 POLR2GP62487 172 aaKnown RBP eCLIP11.3□□□□□ -0.6
MSL3-207ENST00000398527 TRAP1Q12931 704 aaKnown RBP11.3□□□□□ -0.6
MSL3-207ENST00000398527 COASYQ13057 564 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 MTMR3Q13615 1198 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 ZNF792Q3KQV3 632 aa11.3□□□□□ -0.6
MSL3-207ENST00000398527 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms