RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PLD1Q13393 1074 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 TMEM132DQ14C87 1099 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 SF3A1Q15459 793 aaKnown RBP10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 KYAT1Q16773 422 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 ZC2HC1CQ53FD0 456 aaPredicted RBP10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 C9orf57Q5W0N0 161 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 CENPPQ6IPU0 288 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 MFSD6LQ8IWD5 586 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 LEMD2Q8NC56 503 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 ZBTB44Q8NCP5 570 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 DEPDC1BQ8WUY9 529 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 FAM3CQ92520 227 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 KCNN1Q92952 543 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 ITPKCQ96DU7 683 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 OXCT2Q9BYC2 517 aaPredicted RBP10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 IKZF4Q9H2S9 585 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 LMAN1LQ9HAT1 526 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 TRPV4Q9HBA0 871 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 PRMT8Q9NR22 394 aaPredicted RBP10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 NCDNQ9UBB6 729 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 CPSF3Q9UKF6 684 aaKnown RBP10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 PCDHGA2Q9Y5H1 932 aa10.62□□□□□ -0.71
NIFKP1-201ENST00000398317 ARNTLO00327 626 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 PIRO00625 290 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 TBCAO75347 108 aaKnown RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 ZIC2O95409 532 aaPredicted RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 ODC1P11926 461 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 CCNE1P24864 410 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 LONP1P36776 959 aaKnown RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 SOX9P48436 509 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 GTF2BQ00403 316 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 MYBPC2Q14324 1141 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 SLC39A12Q504Y0 691 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 ADALQ6DHV7 355 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 ARMCX5Q6P1M9 558 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 USP49Q70CQ1 688 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 GAREM2Q75VX8 874 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 DGLUCYQ7Z3D6 616 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 DNAJB7Q7Z6W7 309 aaPredicted RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 ARID3BQ8IVW6 561 aaPredicted RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 CD302Q8IX05 232 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 YAF2Q8IY57 180 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 OR10T2Q8NGX3 314 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 TTC8Q8TAM2 541 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 CSGALNACT1Q8TDX6 532 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 LARP4BQ92615 738 aaKnown RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 NELL1Q92832 810 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 EPSTI1Q96J88 318 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 LRRC3BQ96PB8 259 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 TSPAN18Q96SJ8 248 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 LPIN3Q9BQK8 851 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 GPR88Q9GZN0 384 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 CHRDQ9H2X0 955 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 ATXN3LQ9H3M9 355 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 TRPV5Q9NQA5 729 aa10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 SMG5Q9UPR3 1016 aaKnown RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.61□□□□□ -0.71
NIFKP1-201ENST00000398317 MED19A0JLT2 244 aaPredicted RBP10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 ANO9A1A5B4 782 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 SLC38A8A6NNN8 435 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 CYB561D2O14569 222 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 LILRB5O75023 590 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 BMP15O95972 392 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 CHRNB1P11230 501 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 TDGF1P13385 188 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 GABRR2P28476 465 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 DDIT3P35638 169 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 MCM2P49736 904 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 LPAL2Q16609 132 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 RSPO4Q2I0M5 234 aaPredicted RBP10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 GPR158Q5T848 1215 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 DYMQ7RTS9 669 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 BRAPQ7Z569 592 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 SFR1Q86XK3 245 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 FAM200AQ8TCP9 573 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 PSMG2Q969U7 264 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 ZFYVE19Q96K21 471 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 KCTD15Q96SI1 283 aaPredicted RBP10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 SEPT5Q99719 369 aaPredicted RBP10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 MKNK1Q9BUB5 465 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 RBM12Q9NTZ6 932 aaKnown RBP10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 DPP3Q9NY33 737 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 AGO2Q9UKV8 859 aaKnown RBP10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 MAP4K5Q9Y4K4 846 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 CLIC4Q9Y696 253 aa10.6□□□□□ -0.71
NIFKP1-201ENST00000398317 TPRP12270 2363 aaKnown RBP10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 VPS37CA5D8V6 355 aaPredicted RBP10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 CHADO15335 359 aa10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 CYP11A1P05108 521 aa10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 SCP2P22307 547 aa10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 KPNA1P52294 538 aaPredicted RBP10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 CYP4F8P98187 520 aa10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 SATB1Q01826 763 aa10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 KCNA1Q09470 495 aa10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 GAS6Q14393 721 aa10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 PUM1Q14671 1186 aaKnown RBP eCLIP10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 MGAT5BQ3V5L5 792 aa10.59□□□□□ -0.71
NIFKP1-201ENST00000398317 WDR44Q5JSH3 913 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms