RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SLBPQ14493 270 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SUZ12Q15022 739 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 BAK1Q16611 211 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 KBTBD12Q3ZCT8 623 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 PRAMEF13Q5VWM6 474 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CPZQ66K79 652 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 MFSD5Q6N075 450 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 ELMSAN1Q6PJG2 1045 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 GALNT4Q8N4A0 578 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 LINS1Q8NG48 757 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 DEPDC1BQ8WUY9 529 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 LRRC46Q96FV0 321 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 C16orf92Q96LL3 132 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 REEP2Q9BRK0 252 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 PRDM14Q9GZV8 571 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 MMADHCQ9H3L0 296 aaPredicted RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SOX17Q9H6I2 414 aaPredicted RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 C19orf44Q9H6X5 657 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 COPS7BQ9H9Q2 264 aaPredicted RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 PRDM8Q9NQV8 689 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 ACSS2Q9NR19 701 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SACM1LQ9NTJ5 587 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 GFOD1Q9NXC2 390 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 UTP6Q9NYH9 597 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 MORF4L1Q9UBU8 362 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 TMPRSS11EQ9UL52 423 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 TCRBV5S4A2TA0A5A2 114 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 A8MVJ9 347 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 AP3B1O00203 1094 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 CACNB4O00305 520 aaPredicted RBP7.28□□□□□ -1.24
SMCO1-201ENST00000397537 TIMP2P16035 220 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 EN2P19622 333 aaPredicted RBP7.28□□□□□ -1.24
SMCO1-201ENST00000397537 GABRB3P28472 473 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 MTHFRP42898 656 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 LGALS4P56470 323 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 TRIM25Q14258 630 aaKnown RBP7.28□□□□□ -1.24
SMCO1-201ENST00000397537 E4F1Q66K89 784 aaPredicted RBP7.28□□□□□ -1.24
SMCO1-201ENST00000397537 LPCAT2Q7L5N7 544 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 TMC6Q7Z403 805 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 UBE3DQ7Z6J8 389 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 LYSMD2Q8IV50 215 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 SH2D3CQ8N5H7 860 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 MEIOBQ8N635 442 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 ANKLE1Q8NAG6 615 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 CUL5Q93034 780 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 HDAC10Q969S8 669 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 MTFMTQ96DP5 389 aaKnown RBP7.28□□□□□ -1.24
SMCO1-201ENST00000397537 KREMEN1Q96MU8 473 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 P2RX7Q99572 595 aaKnown RBP7.28□□□□□ -1.24
SMCO1-201ENST00000397537 CRACR2AQ9BSW2 395 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 OPA3Q9H6K4 179 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 SERHLQ9NQF3 203 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 LMBRD1Q9NUN5 540 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 CFAP45Q9UL16 551 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 PCDHA2Q9Y5H9 948 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 PCDHA13Q9Y5I0 950 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 HS3ST4Q9Y661 456 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 ASXL1Q8IXJ9 1541 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 GPATCH8Q9UKJ3 1502 aaKnown RBP7.28□□□□□ -1.24
SMCO1-201ENST00000397537 RALGAPBQ86X10 1494 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 ARHGAP35Q9NRY4 1499 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 PTCH1Q13635 1447 aa7.28□□□□□ -1.24
SMCO1-201ENST00000397537 CLCA1A8K7I4 914 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 FANCGO15287 622 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 RIPK2O43353 540 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 ACTL6BO94805 426 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 MT-ND5P03915 603 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 HEXBP07686 556 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 TMIGD3P0DMS9 266 aaPredicted RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 TMOD1P28289 359 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 AKT1P31749 480 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 RFC1P35251 1148 aaPredicted RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 AARSP49588 968 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PRELPP51888 382 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 MALLQ13021 153 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CEP55Q53EZ4 464 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PRAMEF14Q5SWL7 426 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 THEMIS2Q5TEJ8 643 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CDC37L1Q7L3B6 337 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 TMEM110Q86TL2 294 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CCDC117Q8IWD4 279 aaPredicted RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 ZBTB8BQ8NAP8 495 aaPredicted RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 GPR150Q8NGU9 434 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CEP76Q8TAP6 659 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 MRGPRX1Q96LB2 322 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 SNX15Q9NRS6 342 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CLEC1BQ9P126 229 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 LPAR3Q9UBY5 353 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 FBXL7Q9UJT9 491 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 ITM2BQ9Y287 266 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 SF3B6Q9Y3B4 125 aaKnown RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CAMSAP2Q08AD1 1489 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CHD4Q14839 1912 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CHD2O14647 1828 aaKnown RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 C2orf71A6NGG8 1288 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PROM1O43490 865 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PALMO75781 387 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PRKCBP05771 671 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms