RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ZSWIM1Q9BR11 485 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 NXF3Q9H4D5 531 aaKnown RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 SALL4Q9UJQ4 1053 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 NEU2Q9Y3R4 380 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 CYP3A7-CYP3A51PA0A087WV96 503 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 PRRG1O14668 218 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 PMPCBO75439 489 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 FARP2O94887 1054 aaPredicted RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 CYP3A7P24462 503 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 TMPRSS15P98073 1019 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 CCL14Q16627 93 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 HIF1AQ16665 826 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 EML3Q32P44 896 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 DCAF4L1Q3SXM0 396 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 TRIM72Q6ZMU5 477 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 TBC1D1Q86TI0 1168 aaPredicted RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 CPNE8Q86YQ8 564 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 EFHBQ8N7U6 833 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 SLC2A14Q8TDB8 520 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 EPS8L1Q8TE68 723 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 BAP1Q92560 729 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 NDRG1Q92597 394 aaKnown RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 KAT2BQ92831 832 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 ATP6V1E2Q96A05 226 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 KATNAL1Q9BW62 490 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 ATXN3LQ9H3M9 355 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 PLEKHA5Q9HAU0 1116 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 TLK1Q9UKI8 766 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 KCNK1O00180 336 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 ACKR2O00590 384 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 NCF2P19878 526 aaPredicted RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 RFX1P22670 979 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 HTRA3P83110 453 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 PPIL2Q13356 520 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 NFIL3Q16649 462 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.7□□□□□ -0.54
IFT140-202ENST00000397417 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 RMDN1Q96DB5 314 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 TMEM51Q9NW97 253 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 PSD3Q9NYI0 1048 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 PTPRZ1P23471 2315 aaPredicted RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 H0Y3Z8 333 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 TRIM66O15016 1216 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 CDK17Q00537 523 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 FBXO47Q5MNV8 452 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 ACTL9Q8TC94 416 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 C18orf25Q96B23 403 aaPredicted RBP11.7□□□□□ -0.54
IFT140-202ENST00000397417 LENG9Q96B70 501 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 ADAM2Q99965 735 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 ERP44Q9BS26 406 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 PITPNM3Q9BZ71 974 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 CDT1Q9H211 546 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 MOSPD1Q9UJG1 213 aa11.7□□□□□ -0.54
IFT140-202ENST00000397417 TYW5A2RUC4 315 aaKnown RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 RRN3P2A6NIE6 340 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 APOL1O14791 398 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 CFLARO15519 480 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 THP07101 528 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 FAM200BP0CF97 657 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 OTUD4Q01804 1114 aaKnown RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 NSUN2Q08J23 767 aaKnown RBP eCLIP11.69□□□□□ -0.54
IFT140-202ENST00000397417 SREBF2Q12772 1141 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 ZNF484Q5JVG2 852 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 TRIM68Q6AZZ1 485 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 HIBCHQ6NVY1 386 aaPredicted RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 CEP128Q6ZU80 1094 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 EPS8L3Q8TE67 593 aaKnown RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 UPF1Q92900 1129 aaKnown RBP eCLIP11.69□□□□□ -0.54
IFT140-202ENST00000397417 SNF8Q96H20 258 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 SHCBP1LQ9BZQ2 653 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 PPP2R3BQ9Y5P8 575 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 NID2Q14112 1375 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 E5RJQ4 531 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 CLDN5O00501 218 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 USP12O75317 370 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 PPFIA2O75334 1257 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 ARIH2O95376 493 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 ETS1P14921 441 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 ARF4P18085 180 aaPredicted RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 GPD1P21695 349 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 SP100P23497 879 aaPredicted RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 SEMA3FQ13275 785 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 ALS2CLQ60I27 953 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 LRRC31Q6UY01 552 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 EPM2AIP1Q7L775 607 aaPredicted RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 TFAP2DQ7Z6R9 452 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 ADGRF2Q8IZF7 708 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 CCDC197Q8NCU1 140 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 IPMKQ8NFU5 416 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 RAPGEF5Q92565 580 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 SGF29Q96ES7 293 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 CHST7Q9NS84 486 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
IFT140-202ENST00000397417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.69□□□□□ -0.547e-9■■■■□ 21.8
IFT140-202ENST00000397417 DDX43Q9NXZ2 648 aaKnown RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 UBQLN1Q9UMX0 589 aaKnown RBP11.69□□□□□ -0.54
IFT140-202ENST00000397417 MYH15Q9Y2K3 1946 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms