RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 OLFML3Q9NRN5 406 aa14.75□□□□□ -0.05
SEC13-205ENST00000397101 RBM12Q9NTZ6 932 aaKnown RBP14.75□□□□□ -0.05
SEC13-205ENST00000397101 CNTN3Q9P232 1028 aa14.75□□□□□ -0.05
SEC13-205ENST00000397101 NUB1Q9Y5A7 615 aa14.75□□□□□ -0.05
SEC13-205ENST00000397101 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.75□□□□□ -0.05
SEC13-205ENST00000397101 GREB1Q4ZG55 1949 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 FAM208BQ5VWN6 2430 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 K7ERI5 159 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 PSMA7O14818 248 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 PRPF6O94906 941 aaKnown RBP14.74□□□□□ -0.05
SEC13-205ENST00000397101 MAPTP10636 758 aaKnown RBP14.74□□□□□ -0.05
SEC13-205ENST00000397101 MYL4P12829 197 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 PRCPP42785 496 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 PLCB2Q00722 1185 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 STRN3Q13033 797 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 TPD52L1Q16890 204 aaPredicted RBP14.74□□□□□ -0.05
SEC13-205ENST00000397101 STPG1Q5TH74 334 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 Q6ZS52 159 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 ZNF720Q7Z2F6 126 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 HAUS6Q7Z4H7 955 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 TMC8Q8IU68 726 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 SPIRE2Q8WWL2 714 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 RSPRY1Q96DX4 576 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 ACO2Q99798 780 aaKnown RBP14.74□□□□□ -0.05
SEC13-205ENST00000397101 KIFC3Q9BVG8 833 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 CDT1Q9H211 546 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 TMEM134Q9H6X4 195 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 PCDHB8Q9UN66 801 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 CTNND2Q9UQB3 1225 aa14.74□□□□□ -0.05
SEC13-205ENST00000397101 SLC38A8A6NNN8 435 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 ZZEF1O43149 2961 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 OAZ2O95190 189 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 FGF19O95750 216 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 GJA1P17302 382 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 BMP6P22004 513 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 PROZP22891 400 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 ABCD1P33897 745 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 NCKAP1LP55160 1127 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 EHHADHQ08426 723 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 ALCAMQ13740 583 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 ZC2HC1CQ53FD0 456 aaPredicted RBP14.73□□□□□ -0.05
SEC13-205ENST00000397101 HEATR6Q6AI08 1181 aaKnown RBP14.73□□□□□ -0.05
SEC13-205ENST00000397101 TXNDC11Q6PKC3 985 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 C11orf57Q6ZUT1 292 aaPredicted RBP14.73□□□□□ -0.05
SEC13-205ENST00000397101 CEP120Q8N960 986 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 KIAA0895Q8NCT3 520 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 FAM200AQ8TCP9 573 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 NELFBQ8WX92 580 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 BICD1Q96G01 975 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 ZC3H10Q96K80 434 aaKnown RBP14.73□□□□□ -0.05
SEC13-205ENST00000397101 ACAP3Q96P50 834 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 ACCSQ96QU6 501 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 TSG101Q99816 390 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 MRPL4Q9BYD3 311 aaKnown RBP14.73□□□□□ -0.05
SEC13-205ENST00000397101 FGFBP2Q9BYJ0 223 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 ARRDC1-AS1Q9H2J1 176 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 SLITRK6Q9H5Y7 841 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 EXOC7Q9UPT5 735 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 YIPF1Q9Y548 306 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 ASB3Q9Y575 518 aa14.73□□□□□ -0.05
SEC13-205ENST00000397101 A0A1W2PRU2 124 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 BECN2A8MW95 431 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 M0QZQ0 153 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 EIF3DO15371 548 aaKnown RBP eCLIP14.72□□□□□ -0.05
SEC13-205ENST00000397101 KCNK5O95279 499 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 MCF2P10911 925 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 SOX9P48436 509 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 ZNF165P49910 485 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 CASP5P51878 434 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 STX17P56962 302 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 PAK1Q13153 545 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 SF3A2Q15428 464 aaKnown RBP14.72□□□□□ -0.05
SEC13-205ENST00000397101 ZNF568Q3ZCX4 644 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 RNF19BQ6ZMZ0 732 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 ARID3BQ8IVW6 561 aaPredicted RBP14.72□□□□□ -0.05
SEC13-205ENST00000397101 GUF1Q8N442 669 aaKnown RBP14.72□□□□□ -0.05
SEC13-205ENST00000397101 GLIS3Q8NEA6 775 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 DHTKD1Q96HY7 919 aaPredicted RBP14.72□□□□□ -0.05
SEC13-205ENST00000397101 FUCA2Q9BTY2 467 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 MKNK1Q9BUB5 465 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 TMEM206Q9H813 350 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 C2orf42Q9NWW7 574 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 HSFX1Q9UBD0 423 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 TRIP11Q15643 1979 aa14.72□□□□□ -0.05
SEC13-205ENST00000397101 BICDL2A1A5D9 508 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 PPP1R3GB7ZBB8 358 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 ABLIM1O14639 778 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 AXIN1O15169 862 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 ATG13O75143 517 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 RPP40O75818 363 aaKnown RBP14.71□□□□□ -0.05
SEC13-205ENST00000397101 CAVIN2O95810 425 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 CPB1P15086 417 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 CD44P16070 742 aaKnown RBP14.71□□□□□ -0.05
SEC13-205ENST00000397101 MATR3P43243 847 aaKnown RBP eCLIP14.71□□□□□ -0.05
SEC13-205ENST00000397101 EPHB3P54753 998 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 YWHAHQ04917 246 aaPredicted RBP14.71□□□□□ -0.05
SEC13-205ENST00000397101 GPR17Q13304 367 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 CAMKK1Q8N5S9 505 aa14.71□□□□□ -0.05
SEC13-205ENST00000397101 KDF1Q8NAX2 398 aaPredicted RBP14.71□□□□□ -0.05
SEC13-205ENST00000397101 TMEM161BQ8NDZ6 487 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms