RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MAPRE1Q15691 268 aaKnown RBP20.48■□□□□ 0.87
HOXA9-202ENST00000396345 FAM171BQ6P995 826 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 TMC5Q6UXY8 1006 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 LUZP1Q86V48 1076 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 TTC39CQ8N584 583 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 CMASQ8NFW8 434 aaPredicted RBP20.48■□□□□ 0.87
HOXA9-202ENST00000396345 FAM200AQ8TCP9 573 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 ARID3AQ99856 593 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 DPEP3Q9H4B8 488 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 CRTAC1Q9NQ79 661 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 PCDHB5Q9Y5E4 795 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 CILPO75339 1184 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 HNRNPA1P09651 372 aaKnown RBP eCLIP20.47■□□□□ 0.87
HOXA9-202ENST00000396345 SLC9A1P19634 815 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 YWHAEP62258 255 aaKnown RBP20.47■□□□□ 0.87
HOXA9-202ENST00000396345 TPM4P67936 248 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 CCDC142Q17RM4 750 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 AAK1Q2M2I8 961 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 MDH1BQ5I0G3 518 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 CES5AQ6NT32 575 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 TRIM65Q6PJ69 517 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 ARHGEF19Q8IW93 802 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 PPM1KQ8N3J5 372 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 B3GALNT2Q8NCR0 500 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 SMRP1Q8NCR6 262 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 MYCBPAPQ8TBZ2 947 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 SPPL2BQ8TCT7 592 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 TNIP3Q96KP6 325 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 ADAM7Q9H2U9 754 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 CRISPLD1Q9H336 500 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 FAM124BQ9H5Z6 455 aaPredicted RBP20.47■□□□□ 0.87
HOXA9-202ENST00000396345 CISHQ9NSE2 258 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 ABI2Q9NYB9 513 aaPredicted RBP20.47■□□□□ 0.87
HOXA9-202ENST00000396345 HSFX1Q9UBD0 423 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 HMGXB4Q9UGU5 601 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 SLC27A5Q9Y2P5 690 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 INSL5Q9Y5Q6 135 aa20.47■□□□□ 0.87
HOXA9-202ENST00000396345 LRRC10BA6NIK2 292 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 TRIM21P19474 475 aaKnown RBP20.46■□□□□ 0.87
HOXA9-202ENST00000396345 PON1P27169 355 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 HOXA9P31269 272 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 ORC1Q13415 861 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 SMAD4Q13485 552 aaKnown RBP20.46■□□□□ 0.87
HOXA9-202ENST00000396345 FKBP15Q5T1M5 1219 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 PHLDB3Q6NSJ2 640 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 C4orf50Q6ZRC1 276 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 RRAGAQ7L523 313 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 ACOT1Q86TX2 421 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 SPATA2LQ8IUW3 424 aaPredicted RBP20.46■□□□□ 0.87
HOXA9-202ENST00000396345 CRYBG2Q8N1P7 616 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.46■□□□□ 0.87
HOXA9-202ENST00000396345 WHAMMQ8TF30 809 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 MYLPFQ96A32 169 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 LPIN3Q9BQK8 851 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 NT5C1AQ9BXI3 368 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 PRKD2Q9BZL6 878 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 DNAI2Q9GZS0 605 aa20.46■□□□□ 0.87
HOXA9-202ENST00000396345 SPTBN5Q9NRC6 3674 aaKnown RBP20.46■□□□□ 0.87
HOXA9-202ENST00000396345 GOLGA6L19H0YKK7 550 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 CCL16O15467 120 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 MBTPS2O43462 519 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 LRG1P02750 347 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 TUFMP49411 452 aaKnown RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 ZNF445P59923 1031 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 MRPS5P82675 430 aaKnown RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 GCNT1Q02742 428 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 PUS10Q3MIT2 529 aaKnown RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 CYP26C1Q6V0L0 522 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 GPR149Q86SP6 731 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 TTC9BQ8N6N2 239 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 ATXN2LQ8WWM7 1075 aaKnown RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 SMG7Q92540 1137 aaKnown RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 KAT5Q92993 513 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 ZNF707Q96C28 371 aaPredicted RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 TWNKQ96RR1 684 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 SEPT5Q99719 369 aaPredicted RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 COL25A1Q9BXS0 654 aaPredicted RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 PIDD1Q9HB75 910 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 ABCB6Q9NP58 842 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 UBE2TQ9NPD8 197 aaPredicted RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 USP15Q9Y4E8 981 aaPredicted RBP20.45■□□□□ 0.86
HOXA9-202ENST00000396345 YIPF1Q9Y548 306 aa20.45■□□□□ 0.86
HOXA9-202ENST00000396345 GRXCR2A6NFK2 248 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 LGALS16A8MUM7 142 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 XYLBO75191 536 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 PAPLNO95428 1278 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 HAPLN1P10915 354 aaPredicted RBP20.44■□□□□ 0.86
HOXA9-202ENST00000396345 ALDH1A3P47895 512 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 CYP27A1Q02318 531 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 KCNMA1Q12791 1236 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 TWF1Q12792 350 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 PLD1Q13393 1074 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 MGAT5BQ3V5L5 792 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 ATAT1Q5SQI0 421 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 PTCRAQ6ISU1 281 aaPredicted RBP20.44■□□□□ 0.86
HOXA9-202ENST00000396345 APTXQ7Z2E3 356 aaKnown RBP20.44■□□□□ 0.86
HOXA9-202ENST00000396345 UBR7Q8N806 425 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 FEZF2Q8TBJ5 459 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 PCED1BQ96HM7 432 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 FUBP3Q96I24 572 aaKnown RBP eCLIP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms