RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 ZSCAN32Q9NX65 697 aa6.65□□□□□ -1.34
CDKN3-203ENST00000395577 TBC1D30Q9Y2I9 924 aa6.65□□□□□ -1.34
CDKN3-203ENST00000395577 DUSP10Q9Y6W6 482 aa6.65□□□□□ -1.34
CDKN3-203ENST00000395577 ZNF536O15090 1300 aa6.65□□□□□ -1.35
CDKN3-203ENST00000395577 ARAP3Q8WWN8 1544 aa6.65□□□□□ -1.35
CDKN3-203ENST00000395577 ADAMTSL3P82987 1691 aa6.65□□□□□ -1.35
CDKN3-203ENST00000395577 NPEPPSL1A6NEC2 478 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 LGALS16A8MUM7 142 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 RAB27BO00194 218 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 PPFIA4O75335 1185 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 RAD17O75943 681 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 INMTO95050 263 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 A1BGP04217 495 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 BTF3P20290 206 aaKnown RBP6.64□□□□□ -1.35
CDKN3-203ENST00000395577 ACVR2AP27037 513 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 CNR2P34972 360 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 CCT5P48643 541 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 GALNT1Q10472 559 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-203ENST00000395577 DCAF17Q5H9S7 520 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-203ENST00000395577 TCTN3Q6NUS6 607 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 SYT12Q8IV01 421 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 CACNA2D3Q8IZS8 1091 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 FUKQ8N0W3 1084 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 MIEF2Q96C03 454 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 PPP1R9BQ96SB3 815 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 SMOQ99835 787 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 ISCA1Q9BUE6 129 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 TTYH3Q9C0H2 523 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 HEYLQ9NQ87 328 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-203ENST00000395577 ETAA1Q9NY74 926 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 PPP4R1LQ9P1A2 415 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 LRFN1Q9P244 771 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 ZFR2Q9UPR6 939 aaKnown RBP6.64□□□□□ -1.35
CDKN3-203ENST00000395577 SLC30A1Q9Y6M5 507 aa6.64□□□□□ -1.35
CDKN3-203ENST00000395577 LOC102723971A0A1B0GUV8 181 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 TRIM13O60858 407 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 POU5F1BQ06416 359 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 ZNF844Q08AG5 666 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 IQCB1Q15051 598 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 RAB30Q15771 203 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 PLA1AQ53H76 456 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 TSHZ3Q63HK5 1081 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 SLC30A10Q6XR72 485 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 GSPT2Q8IYD1 628 aaKnown RBP6.63□□□□□ -1.35
CDKN3-203ENST00000395577 GLIS1Q8NBF1 620 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 TRAPPC12Q8WVT3 735 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 SNX27Q96L92 541 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 SLC46A1Q96NT5 459 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 TRIB1Q96RU8 372 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 PNKPQ96T60 521 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 NAP1L4Q99733 375 aaKnown RBP6.63□□□□□ -1.35
CDKN3-203ENST00000395577 MESP1Q9BRJ9 268 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 UBA5Q9GZZ9 404 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 GRHPRQ9UBQ7 328 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 GTF2A1LQ9UNN4 478 aa6.63□□□□□ -1.35
CDKN3-203ENST00000395577 FRMPD1Q5SYB0 1578 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 NPC1O15118 1278 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 IDEP14735 1019 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 CHRM3P20309 590 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 GABRB3P28472 473 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 CPT1AP50416 773 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 COPAP53621 1224 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 NHLH2Q02577 135 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 HHEXQ03014 270 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 BOP1Q14137 746 aaKnown RBP6.62□□□□□ -1.35
CDKN3-203ENST00000395577 ARHGEF7Q14155 803 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 SPARCL1Q14515 664 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 TAPT1Q6NXT6 567 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 KRT28Q7Z3Y7 464 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 POLNQ7Z5Q5 900 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 GAS2L3Q86XJ1 694 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 LRRC56Q8IYG6 542 aaPredicted RBP6.62□□□□□ -1.35
CDKN3-203ENST00000395577 ANKRD35Q8N283 1001 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 PSD4Q8NDX1 1056 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 NSUN7Q8NE18 718 aaKnown RBP6.62□□□□□ -1.35
CDKN3-203ENST00000395577 IPO4Q8TEX9 1081 aaKnown RBP6.62□□□□□ -1.35
CDKN3-203ENST00000395577 TOX2Q96NM4 488 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 PAGR1Q9BTK6 254 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.62□□□□□ -1.35
CDKN3-203ENST00000395577 AS3MTQ9HBK9 375 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 XPNPEP3Q9NQH7 507 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 DACT1Q9NYF0 836 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 RGL1Q9NZL6 768 aa6.62□□□□□ -1.35
CDKN3-203ENST00000395577 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.62□□□□□ -1.35
CDKN3-203ENST00000395577 PTPRMP28827 1452 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 LMTK3Q96Q04 1460 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 A0A087WZ62 844 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 AQP12BA6NM10 295 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 H7C4K7 107 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 LEFTY2O00292 366 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 DCLK1O15075 740 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 CCP110O43303 1012 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 FOXS1O43638 330 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 WDHD1O75717 1129 aaPredicted RBP6.61□□□□□ -1.35
CDKN3-203ENST00000395577 ATXN1LP0C7T5 689 aaKnown RBP6.61□□□□□ -1.35
CDKN3-203ENST00000395577 TPH1P17752 444 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 TOB1P50616 345 aaPredicted RBP6.61□□□□□ -1.35
CDKN3-203ENST00000395577 SATB1Q01826 763 aa6.61□□□□□ -1.35
CDKN3-203ENST00000395577 INSCQ1MX18 579 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms