RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 NFKB2Q00653 900 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 OS9Q13438 667 aaPredicted RBP6.38□□□□□ -1.39
AP3S1-202ENST00000395548 TDGQ13569 410 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 PUM3Q15397 648 aaKnown RBP6.38□□□□□ -1.39
AP3S1-202ENST00000395548 NTRK3Q16288 839 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 CSRP2Q16527 193 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 SPECC1Q5M775 1068 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 LAIR1Q6GTX8 287 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 CES5AQ6NT32 575 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 C19orf48Q6RUI8 117 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.38□□□□□ -1.39
AP3S1-202ENST00000395548 ARMCX2Q7L311 632 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 RBM23Q86U06 439 aaKnown RBP6.38□□□□□ -1.39
AP3S1-202ENST00000395548 SCUBE1Q8IWY4 988 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 P2RX5Q93086 422 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 TOP1MTQ969P6 601 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 IL17RAQ96F46 866 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 ZSWIM3Q96MP5 696 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 IPO9Q96P70 1041 aaKnown RBP6.38□□□□□ -1.39
AP3S1-202ENST00000395548 BBC3Q96PG8 261 aaPredicted RBP6.38□□□□□ -1.39
AP3S1-202ENST00000395548 KCNJ15Q99712 375 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 MTG1Q9BT17 334 aaPredicted RBP6.38□□□□□ -1.39
AP3S1-202ENST00000395548 ALG1Q9BT22 464 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 LSM14BQ9BX40 385 aaKnown RBP6.38□□□□□ -1.39
AP3S1-202ENST00000395548 CLMPQ9H6B4 373 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 CABP5Q9NP86 173 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 HOMER2Q9NSB8 354 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 SEMA4GQ9NTN9 838 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 WNT16Q9UBV4 365 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 DUSP12Q9UNI6 340 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 ASTN1O14525 1302 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 TANC1Q9C0D5 1861 aa6.38□□□□□ -1.39
AP3S1-202ENST00000395548 ZNFX1Q9P2E3 1918 aaKnown RBP6.37□□□□□ -1.39
AP3S1-202ENST00000395548 EMSYQ7Z589 1322 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 FAM221BA6H8Z2 402 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 ENO4A6NNW6 628 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 KPNA6O60684 536 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 NBNO60934 754 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 CSPG5O95196 566 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 KCNK5O95279 499 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 SOD2P04179 222 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 HLA-DOAP06340 250 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 CPT1AP50416 773 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 RIPPLY3P57055 190 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 GSTO1P78417 241 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 CNGB1Q14028 1251 aaPredicted RBP6.37□□□□□ -1.39
AP3S1-202ENST00000395548 GPNMBQ14956 572 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 TMEM132BQ14DG7 1078 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 PTGISQ16647 500 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 COL28A1Q2UY09 1125 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 IQSEC1Q6DN90 963 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 VASNQ6EMK4 673 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 TMC5Q6UXY8 1006 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 ADGRD2Q7Z7M1 963 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 TEX11Q8IYF3 940 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 ZBTB44Q8NCP5 570 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 LINS1Q8NG48 757 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 UHMK1Q8TAS1 419 aaKnown RBP6.37□□□□□ -1.39
AP3S1-202ENST00000395548 ATP8B4Q8TF62 1192 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 CLEC4DQ8WXI8 215 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 YTHDC1Q96MU7 727 aaKnown RBP6.37□□□□□ -1.39
AP3S1-202ENST00000395548 RBM15Q96T37 977 aaKnown RBP eCLIP6.37□□□□□ -1.39
AP3S1-202ENST00000395548 NOL10Q9BSC4 688 aaKnown RBP6.37□□□□□ -1.39
AP3S1-202ENST00000395548 PUS3Q9BZE2 481 aaKnown RBP6.37□□□□□ -1.39
AP3S1-202ENST00000395548 CCDC113Q9H0I3 377 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 S1PR5Q9H228 398 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 FTSJ1Q9UET6 329 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 MSRB2Q9Y3D2 182 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 FREM2Q5SZK8 3169 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 DOPEY1Q5JWR5 2465 aa6.37□□□□□ -1.39
AP3S1-202ENST00000395548 ESYT3A0FGR9 886 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 CAPN8A6NHC0 703 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 DCNP07585 359 aaKnown RBP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 COL6A2P12110 1019 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 MTHFRP42898 656 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 MASP1P48740 699 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 MLLT6P55198 1093 aaPredicted RBP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 PURAQ00577 322 aaKnown RBP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 SETQ01105 290 aaPredicted RBP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 ITIH3Q06033 890 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 SRSF1Q07955 248 aaKnown RBP eCLIP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 TUSC3Q13454 348 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 RASGRF1Q13972 1273 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 NONOQ15233 471 aaKnown RBP eCLIP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 SHROOM1Q2M3G4 852 aaPredicted RBP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 MTERF2Q49AM1 385 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 YOD1Q5VVQ6 348 aaPredicted RBP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 ANKRD54Q6NXT1 300 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 TMEM184AQ6ZMB5 413 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 ACER1Q8TDN7 264 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 LPIN2Q92539 896 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 MAP4K1Q92918 833 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 EVI5LQ96CN4 794 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 GPR20Q99678 358 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 CDC6Q99741 560 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 FAM126AQ9BYI3 521 aaPredicted RBP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 IFIH1Q9BYX4 1025 aaKnown RBP6.36□□□□□ -1.39
AP3S1-202ENST00000395548 DNAJC18Q9H819 358 aa6.36□□□□□ -1.39
AP3S1-202ENST00000395548 TBC1D17Q9HA65 648 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms