RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 C9orf57Q5W0N0 161 aa21.52■■□□□ 1.04
PRKCD-202ENST00000394729 SCUBE3Q8IX30 993 aa21.52■■□□□ 1.04
PRKCD-202ENST00000394729 CCDC114Q96M63 670 aa21.52■■□□□ 1.04
PRKCD-202ENST00000394729 CCDC66A2RUB6 948 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 E5RJQ4 531 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 PROSCO94903 275 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 KRT3P12035 628 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 GGCXP38435 758 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 OR6B2Q6IFH4 312 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 CCDC137Q6PK04 289 aaKnown RBP21.51■■□□□ 1.03
PRKCD-202ENST00000394729 TRIM72Q6ZMU5 477 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 SLC13A5Q86YT5 568 aaPredicted RBP21.51■■□□□ 1.03
PRKCD-202ENST00000394729 UHMK1Q8TAS1 419 aaKnown RBP21.51■■□□□ 1.03
PRKCD-202ENST00000394729 NDRG1Q92597 394 aaKnown RBP21.51■■□□□ 1.03
PRKCD-202ENST00000394729 RPS6KC1Q96S38 1066 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 NT5C1AQ9BXI3 368 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 BARX2Q9UMQ3 279 aaPredicted RBP21.51■■□□□ 1.03
PRKCD-202ENST00000394729 MAP2K7O14733 419 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 FGFR1P11362 822 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 PSMA2P25787 234 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 ITIH3Q06033 890 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 PLEKHA7Q6IQ23 1121 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 OR2W6PQ8NHA6 318 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.51■■□□□ 1.03
PRKCD-202ENST00000394729 CREBZFQ9NS37 354 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 ADAMTS4O75173 837 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 TOMM70O94826 608 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 AENQ8WTP8 325 aaKnown RBP21.51■■□□□ 1.03
PRKCD-202ENST00000394729 TRPV6Q9H1D0 765 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 HPCAL4Q9UM19 191 aa21.51■■□□□ 1.03
PRKCD-202ENST00000394729 PLTPP55058 493 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 HADHBP55084 474 aaKnown RBP21.5■■□□□ 1.03
PRKCD-202ENST00000394729 C1QBPQ07021 282 aaKnown RBP21.5■■□□□ 1.03
PRKCD-202ENST00000394729 FBXO47Q5MNV8 452 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 CLEC4CQ8WTT0 213 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 TRIM11Q96F44 468 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 CLDN5O00501 218 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 SCNN1GP51170 649 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 YWHAEP62258 255 aaKnown RBP21.5■■□□□ 1.03
PRKCD-202ENST00000394729 PDCLQ13371 301 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 C15orf59Q2T9L4 293 aaPredicted RBP21.5■■□□□ 1.03
PRKCD-202ENST00000394729 SH3TC2Q8TF17 1288 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 MIOSQ9NXC5 875 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 FAN1Q9Y2M0 1017 aa21.5■■□□□ 1.03
PRKCD-202ENST00000394729 RANBP2P49792 3224 aaKnown RBP21.49■■□□□ 1.03
PRKCD-202ENST00000394729 LRRD1A4D1F6 860 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 F8W810 466 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 MTA2O94776 668 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 MYBL1P10243 752 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 AVENQ9NQS1 362 aaPredicted RBP21.49■■□□□ 1.03
PRKCD-202ENST00000394729 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.49■■□□□ 1.03
PRKCD-202ENST00000394729 KPNA7A9QM74 516 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 PTGESO14684 152 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 MAP3K6O95382 1288 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 KRT14P02533 472 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 KRT1P04264 644 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 MCM3P25205 808 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 PMF1Q6P1K2 205 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 CCDC26Q8TAB7 109 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 LRRN4Q8WUT4 740 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 DDX27Q96GQ7 796 aaKnown RBP21.49■■□□□ 1.03
PRKCD-202ENST00000394729 UTP11Q9Y3A2 253 aaKnown RBP21.49■■□□□ 1.03
PRKCD-202ENST00000394729 SCINQ9Y6U3 715 aa21.49■■□□□ 1.03
PRKCD-202ENST00000394729 TMEM191CA6NGB0 347 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 MED7O43513 233 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 MGEA5O60502 916 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 CALB1P05937 261 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 KCTD16Q68DU8 428 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 TAF2Q6P1X5 1199 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 RAPGEF5Q92565 580 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 HSPH1Q92598 858 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 PADI3Q9ULW8 664 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 SYNJ2BP-COX16A0A087WUM0 186 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 LCP1P13796 627 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 MTM1Q13496 603 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 SCYL2Q6P3W7 929 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 CTU1Q7Z7A3 348 aaKnown RBP21.48■■□□□ 1.03
PRKCD-202ENST00000394729 CCDC25Q86WR0 208 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 TTC30AQ86WT1 665 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 JAMLQ86YT9 394 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 GDF3Q9NR23 364 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 FAM105AQ9NUU6 356 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 COX16Q9P0S2 106 aa21.48■■□□□ 1.03
PRKCD-202ENST00000394729 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.48■■□□□ 1.03
PRKCD-202ENST00000394729 ATICP31939 592 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 GPD2P43304 727 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 EPHB4P54760 987 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 ITGA7Q13683 1181 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 HSP90B2PQ58FF3 399 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 MAATS1Q7Z4T9 603 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 UBQLN1Q9UMX0 589 aaKnown RBP21.47■■□□□ 1.03
PRKCD-202ENST00000394729 Q9Y3F1 56 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 ATP8B3O60423 1300 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 GOLGA6BA6NDN3 693 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 CCDC188H7C350 402 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 ALDH1A1P00352 501 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 CD48P09326 243 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 CLCNKBP51801 687 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 PAK2Q13177 524 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 PPP1R7Q15435 360 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms