RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 PPEF2O14830 753 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 ERBB2P04626 1255 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 KRT3P12035 628 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 RFC1P35251 1148 aaPredicted RBP19.22■□□□□ 0.67
ACTN4-202ENST00000390009 GSCP56915 257 aaPredicted RBP19.22■□□□□ 0.67
ACTN4-202ENST00000390009 SREBF2Q12772 1141 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 LRRC38Q5VT99 294 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 ALKAL1Q6UXT8 129 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 DPH6Q7L8W6 267 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 ANKS1BQ7Z6G8 1248 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 XYLT1Q86Y38 959 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 C7orf31Q8N865 590 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 BEST2Q8NFU1 509 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 FAM76AQ8TAV0 307 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 RNF25Q96BH1 459 aaPredicted RBP19.22■□□□□ 0.67
ACTN4-202ENST00000390009 APOL6Q9BWW8 343 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 NT5C1AQ9BXI3 368 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 CNTN3Q9P232 1028 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 WDR35Q9P2L0 1181 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 CENPFP49454 3210 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 AKAP5P24588 427 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 GPD2P43304 727 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 PPP1R7Q15435 360 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 LRIG3Q6UXM1 1119 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 C18orf25Q96B23 403 aaPredicted RBP19.21■□□□□ 0.67
ACTN4-202ENST00000390009 RBM41Q96IZ5 413 aaKnown RBP19.21■□□□□ 0.67
ACTN4-202ENST00000390009 TXLNGYQ9BZA5 131 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 PARP2Q9UGN5 583 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 R3HDM2Q9Y2K5 976 aaKnown RBP19.21■□□□□ 0.67
ACTN4-202ENST00000390009 SNX9Q9Y5X1 595 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 PPFIA2O75334 1257 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 GNAT1P11488 350 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 HOXC8P31273 242 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 CETN2P41208 172 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 KRT17Q04695 432 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 NFX1Q12986 1120 aaKnown RBP19.21■□□□□ 0.67
ACTN4-202ENST00000390009 PDCLQ13371 301 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 ZFYVE27Q5T4F4 411 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 RCOR2Q8IZ40 523 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 TRPV1Q8NER1 839 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 JOSD2Q8TAC2 188 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 HOMER3Q9NSC5 361 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 KIAA1257Q9ULG3 409 aa19.21■□□□□ 0.67
ACTN4-202ENST00000390009 MYADML2A6NDP7 307 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 PI4K2BG5E9Z4 385 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 H0YGN5 161 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 DUSP11O75319 330 aaKnown RBP19.2■□□□□ 0.66
ACTN4-202ENST00000390009 KRT1P04264 644 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 C6orf222P0C671 652 aaPredicted RBP19.2■□□□□ 0.66
ACTN4-202ENST00000390009 PSMA2P25787 234 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 GABRB2P47870 512 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 CRYBB1P53674 252 aaPredicted RBP19.2■□□□□ 0.66
ACTN4-202ENST00000390009 ZNF268Q14587 947 aaPredicted RBP19.2■□□□□ 0.66
ACTN4-202ENST00000390009 CEP85LQ5SZL2 805 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 LRRC52Q8N7C0 313 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 UBA3Q8TBC4 463 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 SLITRK1Q96PX8 696 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 METTL5Q9NRN9 209 aaKnown RBP19.2■□□□□ 0.66
ACTN4-202ENST00000390009 RNF19AQ9NV58 838 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 ATP8A1Q9Y2Q0 1164 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 NFS1Q9Y697 457 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 TLL2Q9Y6L7 1015 aa19.2■□□□□ 0.66
ACTN4-202ENST00000390009 TXNRD3NBQ6F5E7 133 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 NME8Q8N427 588 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 FNIP1Q8TF40 1166 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 GRK7Q8WTQ7 553 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 MRPL45Q9BRJ2 306 aaKnown RBP19.19■□□□□ 0.66
ACTN4-202ENST00000390009 TSPAN16Q9UKR8 245 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 UBQLN1Q9UMX0 589 aaKnown RBP19.19■□□□□ 0.66
ACTN4-202ENST00000390009 CYP3A5P20815 502 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 CCNG2Q16589 344 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 SPDYCQ5MJ68 293 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 UBXN11Q5T124 520 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 C9orf57Q5W0N0 161 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 LCLAT1Q6UWP7 414 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 C12orf29Q8N999 325 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 OR2W6PQ8NHA6 318 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 SCN10AQ9Y5Y9 1956 aa19.19■□□□□ 0.66
ACTN4-202ENST00000390009 MFSD7Q6UXD7 560 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 SYDE1Q6ZW31 735 aaPredicted RBP19.18■□□□□ 0.66
ACTN4-202ENST00000390009 EMC1Q8N766 993 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 ATL2Q8NHH9 583 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 ART4Q93070 314 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 MCRS1Q96EZ8 462 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 CCDC114Q96M63 670 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 ZIC5Q96T25 663 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 DDX56Q9NY93 547 aaKnown RBP19.18■□□□□ 0.66
ACTN4-202ENST00000390009 KLK14Q9P0G3 267 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 MTRF1LQ9UGC7 380 aaKnown RBP19.18■□□□□ 0.66
ACTN4-202ENST00000390009 FEZ2Q9UHY8 353 aaPredicted RBP19.18■□□□□ 0.66
ACTN4-202ENST00000390009 SMIM28A0A1B0GU29 152 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 CA12O43570 354 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 KRT10P13645 584 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 ATF7P17544 494 aaPredicted RBP19.18■□□□□ 0.66
ACTN4-202ENST00000390009 ADCY2Q08462 1091 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 ODF2Q5BJF6 829 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 KCTD16Q68DU8 428 aa19.18■□□□□ 0.66
ACTN4-202ENST00000390009 IPO4Q8TEX9 1081 aaKnown RBP19.18■□□□□ 0.66
ACTN4-202ENST00000390009 ACSF2Q96CM8 615 aaPredicted RBP19.18■□□□□ 0.66
ACTN4-202ENST00000390009 FAM118BQ9BPY3 351 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms