RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TREHO43280 583 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 KPNA6O60684 536 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 MICAL2O94851 1124 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 GOLGA6DP0CG33 693 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 AKR1A1P14550 325 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 GPD2P43304 727 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 RPL21P46778 160 aaKnown RBP20.33■□□□□ 0.85
GMDS-201ENST00000380805 YARSP54577 528 aaKnown RBP20.33■□□□□ 0.85
GMDS-201ENST00000380805 COPS2P61201 443 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 SP3Q02447 781 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 STILQ15468 1287 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 FSCN1Q16658 493 aaKnown RBP20.33■□□□□ 0.85
GMDS-201ENST00000380805 TTMPQ5BVD1 217 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 DCUN1D2Q6PH85 259 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 RCOR2Q8IZ40 523 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 DCLK3Q9C098 648 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 GOLGA6AQ9NYA3 693 aa20.33■□□□□ 0.85
GMDS-201ENST00000380805 DUSP11O75319 330 aaKnown RBP20.33■□□□□ 0.84
GMDS-201ENST00000380805 MYL3P08590 195 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 RALAP11233 206 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 GNAT1P11488 350 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 NDST1P52848 882 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 CRYBB1P53674 252 aaPredicted RBP20.33■□□□□ 0.84
GMDS-201ENST00000380805 CCNG2Q16589 344 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 CYP4A22Q5TCH4 519 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 LCLAT1Q6UWP7 414 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 XYLT1Q86Y38 959 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 TMEM40Q8WWA1 233 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 MCRS1Q96EZ8 462 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 CPXM1Q96SM3 734 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 TRIM31Q9BZY9 425 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 FEZ2Q9UHY8 353 aaPredicted RBP20.33■□□□□ 0.84
GMDS-201ENST00000380805 PLAAQ9Y263 795 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 SNX24Q9Y343 169 aa20.33■□□□□ 0.84
GMDS-201ENST00000380805 C17orf102A2RUQ5 167 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 NKX3-2P78367 333 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 PDCLQ13371 301 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 PTK6Q13882 451 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 EMC10Q5UCC4 262 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 BEST2Q8NFU1 509 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 FBXO25Q8TCJ0 367 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 GRK7Q8WTQ7 553 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 ZNF296Q8WUU4 475 aaPredicted RBP20.32■□□□□ 0.84
GMDS-201ENST00000380805 ART4Q93070 314 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 ARL8AQ96BM9 186 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 ZBTB9Q96C00 473 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 NT5C1AQ9BXI3 368 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 CXCL16Q9H2A7 254 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 CHST7Q9NS84 486 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 DDX56Q9NY93 547 aaKnown RBP20.32■□□□□ 0.84
GMDS-201ENST00000380805 GINS2Q9Y248 185 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 USTQ9Y2C2 406 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 CASP8AP2Q9UKL3 1982 aa20.32■□□□□ 0.84
GMDS-201ENST00000380805 F8VP50 259 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 RECQL4O94761 1208 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 KRT14P02533 472 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 KRT3P12035 628 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 KCNE1P15382 129 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 CETN2P41208 172 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 BEX3Q00994 111 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 DHX9Q08211 1270 aaKnown RBP20.31■□□□□ 0.84
GMDS-201ENST00000380805 NFX1Q12986 1120 aaKnown RBP20.31■□□□□ 0.84
GMDS-201ENST00000380805 UBXN11Q5T124 520 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 FAM76AQ8TAV0 307 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 C1orf54Q8WWF1 131 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 SLITRK1Q96PX8 696 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 NXF3Q9H4D5 531 aaKnown RBP20.31■□□□□ 0.84
GMDS-201ENST00000380805 WHRNQ9P202 907 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 UBQLN1Q9UMX0 589 aaKnown RBP20.31■□□□□ 0.84
GMDS-201ENST00000380805 NEU2Q9Y3R4 380 aa20.31■□□□□ 0.84
GMDS-201ENST00000380805 ERBB2P04626 1255 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 TCF4P15884 667 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 RFC1P35251 1148 aaPredicted RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 KCNJ1P48048 391 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 PSMC1P62191 440 aaKnown RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 ORC1Q13415 861 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 ACAP1Q15027 740 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 TAF2Q6P1X5 1199 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 DRICH1Q6PGQ1 229 aaPredicted RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 ZNF771Q7L3S4 317 aaPredicted RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 ANKS1BQ7Z6G8 1248 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 CCDC50Q8IVM0 306 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 TRPV1Q8NER1 839 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 UPF3AQ9H1J1 476 aaKnown RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 TJP2Q9UDY2 1190 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 TUBGCP4Q9UGJ1 667 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 M0QYV0 167 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 HSPA1AP0DMV8 641 aaKnown RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 HSPA1BP0DMV9 641 aaKnown RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 CYBAP13498 195 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 CYP3A5P20815 502 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 GJA9P57773 515 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 UNC93AQ86WB7 457 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 ATL2Q8NHH9 583 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 CD99L2Q8TCZ2 262 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 HEXIM2Q96MH2 286 aaKnown RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 MIS12Q9H081 205 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 EFR3BQ9Y2G0 817 aa20.3■□□□□ 0.84
GMDS-201ENST00000380805 R3HDM2Q9Y2K5 976 aaKnown RBP20.3■□□□□ 0.84
GMDS-201ENST00000380805 PIRO00625 290 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms