RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 LRSAM1Q6UWE0 723 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 C4orf50Q6ZRC1 276 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 LRRTM3Q86VH5 581 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 PPM1KQ8N3J5 372 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 ATAD1Q8NBU5 361 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 B3GALNT2Q8NCR0 500 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 CMASQ8NFW8 434 aaPredicted RBP18.4■□□□□ 0.54
ITM2B-201ENST00000378549 LMO3Q8TAP4 145 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 FAM200AQ8TCP9 573 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 ARID3AQ99856 593 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 VPS16Q9H269 839 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 TSPY26PQ9H489 355 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 HSFX1Q9UBD0 423 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 LIMA1Q9UHB6 759 aaKnown RBP18.4■□□□□ 0.54
ITM2B-201ENST00000378549 GTF3C4Q9UKN8 822 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 PCDHB5Q9Y5E4 795 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 INSL5Q9Y5Q6 135 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 XIRP2A4UGR9 3374 aa18.4■□□□□ 0.54
ITM2B-201ENST00000378549 CCDC195A0A1B0GUA6 201 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 MYBPHLA2RUH7 354 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 GOLGA6L19H0YKK7 550 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 ATP2C2O75185 946 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 XYLBO75191 536 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 SEC24AO95486 1093 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 MRPS5P82675 430 aaKnown RBP18.39■□□□□ 0.53
ITM2B-201ENST00000378549 PLD1Q13393 1074 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 IQCB1Q15051 598 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 FKBP15Q5T1M5 1219 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 TRIM65Q6PJ69 517 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 SPATA2LQ8IUW3 424 aaPredicted RBP18.39■□□□□ 0.53
ITM2B-201ENST00000378549 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.53
ITM2B-201ENST00000378549 PKMYT1Q99640 499 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 SEPT5Q99719 369 aaPredicted RBP18.39■□□□□ 0.53
ITM2B-201ENST00000378549 NT5C1AQ9BXI3 368 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 PRKD2Q9BZL6 878 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 HSD3B7Q9H2F3 369 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 ADAM7Q9H2U9 754 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 DPEP3Q9H4B8 488 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 PIDD1Q9HB75 910 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 ABCB6Q9NP58 842 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 CRTAC1Q9NQ79 661 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 CISHQ9NSE2 258 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 TMLHEQ9NVH6 421 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 YIPF1Q9Y548 306 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 NME7Q9Y5B8 376 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 DENND4CQ5VZ89 1909 aa18.39■□□□□ 0.53
ITM2B-201ENST00000378549 PATJQ8NI35 1801 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 CILPO75339 1184 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 SLC34A2O95436 690 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 VNN2O95498 520 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 PTPN1P18031 435 aaKnown RBP18.38■□□□□ 0.53
ITM2B-201ENST00000378549 TUFMP49411 452 aaKnown RBP18.38■□□□□ 0.53
ITM2B-201ENST00000378549 CDR1P51861 262 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 COPB1P53618 953 aaKnown RBP18.38■□□□□ 0.53
ITM2B-201ENST00000378549 CYP27A1Q02318 531 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 GCNT1Q02742 428 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 MGAT5BQ3V5L5 792 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 MDH1BQ5I0G3 518 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 PTCRAQ6ISU1 281 aaPredicted RBP18.38■□□□□ 0.53
ITM2B-201ENST00000378549 FAM171BQ6P995 826 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 CYP26C1Q6V0L0 522 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 LUZP1Q86V48 1076 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 MYCBPAPQ8TBZ2 947 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 SMG7Q92540 1137 aaKnown RBP18.38■□□□□ 0.53
ITM2B-201ENST00000378549 MYLPFQ96A32 169 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 FUBP3Q96I24 572 aaKnown RBP eCLIP18.38■□□□□ 0.53
ITM2B-201ENST00000378549 FAM81BQ96LP2 452 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 RIPOR3Q96MK2 946 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 S1PR5Q9H228 398 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 SLC27A5Q9Y2P5 690 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 USP15Q9Y4E8 981 aaPredicted RBP18.38■□□□□ 0.53
ITM2B-201ENST00000378549 NOTCH4Q99466 2003 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 DOCK8Q8NF50 2099 aa18.38■□□□□ 0.53
ITM2B-201ENST00000378549 NCOR1O75376 2440 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 CCL16O15467 120 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 MBTPS2O43462 519 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 ATP1A3P13637 1013 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 SLC9A1P19634 815 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 PON1P27169 355 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 MTHFRP42898 656 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 ALDH1A3P47895 512 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 TWF1Q12792 350 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 CCDC142Q17RM4 750 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 CFAP221Q4G0U5 840 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 ATAT1Q5SQI0 421 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 RRAGAQ7L523 313 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 GPR149Q86SP6 731 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 ACOT1Q86TX2 421 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 ARHGEF19Q8IW93 802 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.37■□□□□ 0.53
ITM2B-201ENST00000378549 ELMOD1Q8N336 334 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 TTC9BQ8N6N2 239 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.37■□□□□ 0.53
ITM2B-201ENST00000378549 PCED1BQ96HM7 432 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 NECTIN4Q96NY8 510 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 RHOBTB2Q9BYZ6 727 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 CRISPLD1Q9H336 500 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 APEX2Q9UBZ4 518 aa18.37■□□□□ 0.53
ITM2B-201ENST00000378549 ATP8B3O60423 1300 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms