RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 EPM2AIP1Q7L775 607 aaPredicted RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 MTMR14Q8NCE2 650 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 SPATA18Q8TC71 538 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 HAPLN2Q9GZV7 340 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 C12orf65Q9H3J6 166 aaKnown RBP8.54□□□□□ -1.04
CKAP2-203ENST00000378037 KCND2Q9NZV8 630 aa8.54□□□□□ -1.04
CKAP2-203ENST00000378037 TRIM66O15016 1216 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 TMEM253P0C7T8 217 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 SPATA31D3P0C874 917 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RBP3P10745 1247 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 IRF1P10914 325 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 NCAM1P13591 858 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 IGFBP6P24592 240 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 LMO2P25791 158 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 STX2P32856 288 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 GRIK1P39086 918 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 ACAD10Q6JQN1 1059 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 SPATA31D4Q6ZUB0 917 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 FMNL3Q8IVF7 1028 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 PPM1NQ8N819 430 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 MCUQ8NE86 351 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RAPGEF5Q92565 580 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 EXT2Q93063 718 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 FAF2Q96CS3 445 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 MAML3Q96JK9 1138 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 PBKQ96KB5 322 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 CABS1Q96KC9 395 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 FIZ1Q96SL8 496 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 ACO2Q99798 780 aaKnown RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 NT5C1AQ9BXI3 368 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 C2orf40Q9H1Z8 148 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 NEUROG2Q9H2A3 272 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 PRMT7Q9NVM4 692 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 MARCOQ9UEW3 520 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 HPCAL4Q9UM19 191 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 L1RE1Q9UN81 338 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 A0A0G2JLL6 359 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 C17orf102A2RUQ5 167 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 ACKR2O00590 384 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 MCF2LO15068 1137 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 ETFBP38117 255 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 ITGA8P53708 1063 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 PCSK7Q16549 785 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 NFIL3Q16649 462 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 NBPF20Q3BBV1 942 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 ZC3H12AQ5D1E8 599 aaKnown RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RFX8Q6ZV50 586 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 PRRT2Q7Z6L0 340 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RSPH3Q86UC2 560 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 C1orf127Q8N9H9 656 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 APPL2Q8NEU8 664 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 CD99L2Q8TCZ2 262 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RXFP2Q8WXD0 754 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 EMID1Q96A84 441 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 PIWIL1Q96J94 861 aaKnown RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 ZSWIM1Q9BR11 485 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 MRPL45Q9BRJ2 306 aaKnown RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 SPON2Q9BUD6 331 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 SMPD4Q9NXE4 827 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 DCTN4Q9UJW0 460 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 FOCADQ5VW36 1801 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 CDH23Q9H251 3354 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 DOCK3Q8IZD9 2030 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 DCDC2CA8MYV0 355 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 DFFAO00273 331 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RASGRF2O14827 1237 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 SHBGP04278 402 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 EIF4BP23588 611 aaKnown RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RFC5P40937 340 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RBP5P82980 135 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 PAPD7Q5XG87 772 aaKnown RBP8.53□□□□□ -1.04
CKAP2-203ENST00000378037 MCOLN2Q8IZK6 566 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 HELQQ8TDG4 1101 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 CRYGNQ8WXF5 182 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 RMDN2Q96LZ7 410 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 ADAM2Q99965 735 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 CCDC77Q9BR77 488 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 DNPEPQ9ULA0 475 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 SNX10Q9Y5X0 201 aa8.53□□□□□ -1.04
CKAP2-203ENST00000378037 F8W810 466 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 CYB561D2O14569 222 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 PPFIA4O75335 1185 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 AMPD2Q01433 879 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 ADIGQ0VDE8 80 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 ZACNQ401N2 412 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 RGMBQ6NW40 437 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 TFAP2DQ7Z6R9 452 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 CACUL1Q86Y37 369 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 SLC13A5Q86YT5 568 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 RNF135Q8IUD6 432 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 RHOT1Q8IXI2 618 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 RYBPQ8N488 228 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 ACTL9Q8TC94 416 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 P3H4Q92791 437 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 IQCDQ96DY2 449 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 RPGRIP1Q96KN7 1286 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 GLT1D1Q96MS3 346 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms