RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SLC17A8Q8NDX2 589 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 CRYGNQ8WXF5 182 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 TRIM56Q9BRZ2 755 aaKnown RBP12.27□□□□□ -0.45
DDR1-227ENST00000376570 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 E5RJQ4 531 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 MT-ND3P03897 115 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 ATP2A2P16615 1042 aaKnown RBP12.26□□□□□ -0.45
DDR1-227ENST00000376570 SDC4P31431 198 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 CTCFP49711 727 aaPredicted RBP12.26□□□□□ -0.45
DDR1-227ENST00000376570 MAMLD1Q13495 774 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 PDIK1LQ8N165 341 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 STKLD1Q8NE28 680 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 MAGEB5Q9BZ81 275 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 NPHS2Q9NP85 383 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 TRIM33Q9UPN9 1127 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 L3MBTL1Q9Y468 752 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 EDN1P05305 212 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 HMBSP08397 361 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 MARSP56192 900 aaKnown RBP12.26□□□□□ -0.45
DDR1-227ENST00000376570 SLC8A3P57103 927 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 PDE1BQ01064 536 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 DHX34Q14147 1143 aaKnown RBP12.26□□□□□ -0.45
DDR1-227ENST00000376570 ZACNQ401N2 412 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 DSTYKQ6XUX3 929 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 ERO1BQ86YB8 467 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 RXFP2Q8WXD0 754 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 GPR88Q9GZN0 384 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 ERAP1Q9NZ08 941 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
DDR1-227ENST00000376570 GPR25O00155 361 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 PROSCO94903 275 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
DDR1-227ENST00000376570 GTF2A2P52657 109 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 GPRC5AQ8NFJ5 357 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 EDEM1Q92611 657 aa12.26□□□□□ -0.45
DDR1-227ENST00000376570 XPO7Q9UIA9 1087 aaKnown RBP12.26□□□□□ -0.45
DDR1-227ENST00000376570 SHANK3Q9BYB0 1731 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 SPATA31C2B4DYI2 1134 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CLDN5O00501 218 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CPP00450 1065 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 HSPA9P38646 679 aaKnown RBP12.25□□□□□ -0.45
DDR1-227ENST00000376570 NOVP48745 357 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 FKBP1AP62942 108 aaKnown RBP12.25□□□□□ -0.45
DDR1-227ENST00000376570 TAF1CQ15572 869 aaPredicted RBP12.25□□□□□ -0.45
DDR1-227ENST00000376570 HIF1AQ16665 826 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 ZC3H12AQ5D1E8 599 aaKnown RBP12.25□□□□□ -0.45
DDR1-227ENST00000376570 FAM117BQ6P1L5 589 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CENPUQ71F23 418 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 TAS1R3Q7RTX0 852 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 RUNDC3BQ96NL0 473 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CGRRF1Q99675 332 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 AP5M1Q9H0R1 490 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 TRABDQ9H4I3 376 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 SLCO1B3Q9NPD5 702 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDR1-227ENST00000376570 NOCTQ9UK39 431 aaKnown RBP12.25□□□□□ -0.45
DDR1-227ENST00000376570 SNCAIPQ9Y6H5 919 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 NHSL1Q5SYE7 1610 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 UPP2O95045 317 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 VNN1O95497 513 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CALB1P05937 261 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 MROH9Q5TGP6 573 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 IER5Q5VY09 327 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 ZDHHC14Q8IZN3 488 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CHST13Q8NET6 341 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 SLC16A10Q8TF71 515 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 LPPQ93052 612 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 TRIM11Q96F44 468 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CALR3Q96L12 384 aaKnown RBP12.25□□□□□ -0.45
DDR1-227ENST00000376570 CDT1Q9H211 546 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 DPP3Q9NY33 737 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 COMMD10Q9Y6G5 202 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 A0A1B0GUL6 1792 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 LCA5LO95447 670 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 GARTP22102 1010 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 SOX11P35716 441 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 NCKAP1LP55160 1127 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 PPP2R5EQ16537 467 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 COBLL1Q53SF7 1204 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 GNASQ5JWF2 1037 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 ARHGEF18Q6ZSZ5 1173 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 SIX6OS1Q8N1H7 587 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 REPS2Q8NFH8 660 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 CAVIN3Q969G5 261 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 DDX20Q9UHI6 824 aaKnown RBP12.25□□□□□ -0.45
DDR1-227ENST00000376570 TSPAN16Q9UKR8 245 aa12.25□□□□□ -0.45
DDR1-227ENST00000376570 PPEF2O14830 753 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 RIPK2O43353 540 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 TBC1D12O60347 775 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 PKN2Q16513 984 aaKnown RBP12.24□□□□□ -0.45
DDR1-227ENST00000376570 MPZL3Q6UWV2 235 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 MAIP1Q8WWC4 291 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 TWNKQ96RR1 684 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 DCLK3Q9C098 648 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 HAPLN2Q9GZV7 340 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms