RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 WDR44Q5JSH3 913 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 CC2D1AQ6P1N0 951 aaPredicted RBP24.97■■□□□ 1.59
C9orf47-202ENST00000375850 CCDC73Q6ZRK6 1079 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 CEP68Q76N32 757 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 TTC8Q8TAM2 541 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 FAM213AQ9BRX8 229 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 GKN1Q9NS71 199 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 SEMA4GQ9NTN9 838 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 TDP1Q9NUW8 608 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 FBXO2Q9UK22 296 aaPredicted RBP24.97■■□□□ 1.59
C9orf47-202ENST00000375850 ITGA11Q9UKX5 1188 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 MORC2Q9Y6X9 1032 aaPredicted RBP24.97■■□□□ 1.59
C9orf47-202ENST00000375850 NCOR2Q9Y618 2525 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 SLC30A4O14863 429 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 KIAA0391O15091 583 aaKnown RBP24.96■■□□□ 1.59
C9orf47-202ENST00000375850 PRPF40AO75400 957 aaKnown RBP24.96■■□□□ 1.59
C9orf47-202ENST00000375850 GCNT3O95395 438 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 POLR2BP30876 1174 aaKnown RBP24.96■■□□□ 1.59
C9orf47-202ENST00000375850 PDGFRLQ15198 375 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 TMEM196Q5HYL7 178 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 TMEM150AQ86TG1 271 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 MON1AQ86VX9 555 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 PDCL2Q8N4E4 241 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 MAB21L3Q8N8X9 362 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 DNAJC19Q96DA6 116 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 TRMT2BQ96GJ1 504 aaKnown RBP24.96■■□□□ 1.59
C9orf47-202ENST00000375850 TMEM206Q9H813 350 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 GDAP2Q9NXN4 497 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 RBAKQ9NYW8 714 aaPredicted RBP24.96■■□□□ 1.59
C9orf47-202ENST00000375850 AGAP1Q9UPQ3 857 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 CLIC4Q9Y696 253 aa24.96■■□□□ 1.59
C9orf47-202ENST00000375850 TRDMT1O14717 391 aaKnown RBP24.95■■□□□ 1.58
C9orf47-202ENST00000375850 ITGB3P05106 788 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 LHX1P48742 406 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 DMWDQ09019 674 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 CUL4AQ13619 759 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 INTS6LQ5JSJ4 861 aaKnown RBP24.95■■□□□ 1.58
C9orf47-202ENST00000375850 USP49Q70CQ1 688 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 SYCP3Q8IZU3 236 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 C1orf127Q8N9H9 656 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 USP13Q92995 863 aaPredicted RBP24.95■■□□□ 1.58
C9orf47-202ENST00000375850 LOXL4Q96JB6 756 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 MYRFLQ96LU7 910 aa24.95■■□□□ 1.58
C9orf47-202ENST00000375850 DDX43Q9NXZ2 648 aaKnown RBP24.95■■□□□ 1.58
C9orf47-202ENST00000375850 MYMKA6NI61 221 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 EXTL3O43909 919 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 CENPBP07199 599 aaPredicted RBP24.94■■□□□ 1.58
C9orf47-202ENST00000375850 PCSK1P29120 753 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 RBP5P82980 135 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 FBXO43Q4G163 708 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 HEATR6Q6AI08 1181 aaKnown RBP24.94■■□□□ 1.58
C9orf47-202ENST00000375850 PRR23CQ6ZRP0 262 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 TOP6BLQ8N6T0 577 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 DDX1Q92499 740 aaKnown RBP24.94■■□□□ 1.58
C9orf47-202ENST00000375850 FUBP3Q96I24 572 aaKnown RBP eCLIP24.94■■□□□ 1.58
C9orf47-202ENST00000375850 PI4K2AQ9BTU6 479 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 SMG9Q9H0W8 520 aaKnown RBP24.94■■□□□ 1.58
C9orf47-202ENST00000375850 L1RE1Q9UN81 338 aa24.94■■□□□ 1.58
C9orf47-202ENST00000375850 R3HCC1Q9Y3T6 440 aaKnown RBP24.94■■□□□ 1.58
C9orf47-202ENST00000375850 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.94■■□□□ 1.58
C9orf47-202ENST00000375850 SCN1AP35498 2009 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 FRMD3A2A2Y4 597 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 AKAP3O75969 853 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 NOL4O94818 638 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 DRD1P21728 446 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 KCNA1Q09470 495 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 CFAP221Q4G0U5 840 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 STXBP4Q6ZWJ1 553 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 DPH6Q7L8W6 267 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 CSGALNACT2Q8N6G5 542 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 HPS4Q9NQG7 708 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 TMLHEQ9NVH6 421 aa24.93■■□□□ 1.58
C9orf47-202ENST00000375850 MAGED2Q9UNF1 606 aaPredicted RBP24.93■■□□□ 1.58
C9orf47-202ENST00000375850 IDEP14735 1019 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 FAM160A1Q05DH4 1040 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 SURF1Q15526 300 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 TXNDC8Q6A555 127 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 CAMKK1Q8N5S9 505 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 FAM160A2Q8N612 972 aaPredicted RBP24.92■■□□□ 1.58
C9orf47-202ENST00000375850 FSIP1Q8NA03 581 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 SAAL1Q96ER3 474 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 CEP295NLQ96MC4 621 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 IKZF4Q9H2S9 585 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 EBF3Q9H4W6 596 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 SLC8A2Q9UPR5 921 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 CCL26Q9Y258 94 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 ANK1P16157 1881 aa24.92■■□□□ 1.58
C9orf47-202ENST00000375850 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.91■■□□□ 1.58
C9orf47-202ENST00000375850 DCDC2BA2VCK2 349 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 TMEM191BP0C7N4 346 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 STAT6P42226 847 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 PDE6CP51160 858 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 MYO1EQ12965 1108 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 SRSF5Q13243 272 aaKnown RBP24.91■■□□□ 1.58
C9orf47-202ENST00000375850 FSTL4Q6MZW2 842 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 SPATA2LQ8IUW3 424 aaPredicted RBP24.91■■□□□ 1.58
C9orf47-202ENST00000375850 CPA6Q8N4T0 437 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 CCDC26Q8TAB7 109 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 GAB3Q8WWW8 586 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 PKMYT1Q99640 499 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms