RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SLC17A7Q9P2U7 560 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 LAMB1P07942 1786 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 FAM237BA0A1B0GVD1 139 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 SH3PXD2BA1X283 911 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 TNNI2P48788 182 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 ADCY7P51828 1080 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 PDE1BQ01064 536 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 MDH1BQ5I0G3 518 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 HP1BP3Q5SSJ5 553 aaPredicted RBP13.55□□□□□ -0.24
PRPF4-201ENST00000374198 TMEM53Q6P2H8 277 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 CAPN12Q6ZSI9 719 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 ICA1LQ8NDH6 482 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 MKNK2Q9HBH9 465 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 POLIQ9UNA4 740 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 NUP98P52948 1817 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 EML1O00423 815 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 SERPINB7O75635 380 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 NT5C2P49902 561 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 CENPCQ03188 943 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 KCNA1Q09470 495 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 FASTKD3Q14CZ7 662 aaKnown RBP13.54□□□□□ -0.24
PRPF4-201ENST00000374198 TLR1Q15399 786 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 PDCD4Q53EL6 469 aaKnown RBP13.54□□□□□ -0.24
PRPF4-201ENST00000374198 EFHC1Q5JVL4 640 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 BORAQ6PGQ7 559 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 ZNF804AQ7Z570 1209 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 ARL10Q8N8L6 244 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 KCNN1Q92952 543 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 PCDHB18PQ96TA0 734 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 FAF1Q9UNN5 650 aaPredicted RBP13.54□□□□□ -0.24
PRPF4-201ENST00000374198 A0A088AWK7 358 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 DENRO43583 198 aaKnown RBP13.54□□□□□ -0.24
PRPF4-201ENST00000374198 ADCY3O60266 1144 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 CYP1A2P05177 515 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 MECOMQ03112 1051 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 TRIP10Q15642 601 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 USP17L2Q6R6M4 530 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 OLFML1Q6UWY5 402 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 C1orf21Q9H246 121 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 THEGQ9P2T0 379 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 KIAA1551Q9HCM1 1747 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 CYP26A1O43174 497 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 TGFB1I1O43294 461 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 PEX1O43933 1283 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 CBFA2T3O75081 653 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 ATP6V1B1P15313 513 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 ADSSP30520 456 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 HALP42357 657 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 PDIA2Q13087 525 aaKnown RBP13.54□□□□□ -0.24
PRPF4-201ENST00000374198 C12orf60Q5U649 245 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 SUSD4Q5VX71 490 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 BANPQ8N9N5 519 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 PLEKHO2Q8TD55 490 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 SLC26A7Q8TE54 656 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 FAM81BQ96LP2 452 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 ACP6Q9NPH0 428 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 UBAP1Q9NZ09 502 aa13.54□□□□□ -0.24
PRPF4-201ENST00000374198 PPARGC1AQ9UBK2 798 aaKnown RBP13.54□□□□□ -0.24
PRPF4-201ENST00000374198 F5H6K3 240 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 DKC1O60832 514 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRPF4-201ENST00000374198 MED24O75448 989 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 GCNT3O95395 438 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 GZMAP12544 262 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 KLRC2P26717 231 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 PMLP29590 882 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 STIP1P31948 543 aaKnown RBP13.53□□□□□ -0.24
PRPF4-201ENST00000374198 FDFT1P37268 417 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 ACADVLP49748 655 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 NCKAP1LP55160 1127 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 PLCB3Q01970 1234 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 HIC1Q14526 733 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 CCDC142Q17RM4 750 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 ZNF410Q86VK4 478 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 CHSY1Q86X52 802 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 COA7Q96BR5 231 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 GCNAQ96QF7 691 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 TSPAN18Q96SJ8 248 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 HNRNPABQ99729 332 aaKnown RBP13.53□□□□□ -0.24
PRPF4-201ENST00000374198 NAP1L4Q99733 375 aaKnown RBP13.53□□□□□ -0.24
PRPF4-201ENST00000374198 MRPL1Q9BYD6 325 aaKnown RBP13.53□□□□□ -0.24
PRPF4-201ENST00000374198 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.244e-7■■■■■ 78.7
PRPF4-201ENST00000374198 AK5Q9Y6K8 562 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 GOLGA8RI6L899 631 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 IL1BP01584 269 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 CD48P09326 243 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 RFX1P22670 979 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 SLC1A1P43005 524 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 RELAQ04206 551 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 SPIDRQ14159 915 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 KRT81Q14533 505 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 EFHC2Q5JST6 749 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 NSMFQ6X4W1 530 aa13.53□□□□□ -0.24
PRPF4-201ENST00000374198 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms