RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 POLBP06746 335 aa11.09□□□□□ -0.63
PGK1-201ENST00000373316 PGM1P36871 562 aa11.09□□□□□ -0.63
PGK1-201ENST00000373316 ACTR2P61160 394 aa11.09□□□□□ -0.63
PGK1-201ENST00000373316 OCA2Q04671 838 aa11.09□□□□□ -0.63
PGK1-201ENST00000373316 NAPEPLDQ6IQ20 393 aa11.09□□□□□ -0.63
PGK1-201ENST00000373316 ZNF720Q7Z2F6 126 aa11.09□□□□□ -0.63
PGK1-201ENST00000373316 SLC9A9Q8IVB4 645 aa11.09□□□□□ -0.63
PGK1-201ENST00000373316 KANSL1LA0AUZ9 987 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 IQCA1LA6NCM1 817 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 C16orf96A6NNT2 1141 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 F8VZ95 297 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 PLA2G6O60733 806 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 SLC2A3P11169 496 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 TGM2P21980 687 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
PGK1-201ENST00000373316 RHPN2Q8IUC4 686 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 PCYOX1LQ8NBM8 494 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 NOA1Q8NC60 698 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 SCFD2Q8WU76 684 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 C1orf54Q8WWF1 131 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 SLC5A5Q92911 643 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 ZC3H7BQ9UGR2 993 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 NCANO14594 1321 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 ESYT3A0FGR9 886 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 A8MXQ7 604 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 ZNF185O15231 689 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 OGTO15294 1046 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 CAPN15O75808 1086 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 CDH2P19022 906 aaPredicted RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 PCSK1P29120 753 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 PCBP1Q15365 356 aaKnown RBP eCLIP11.08□□□□□ -0.646e-6■□□□□ 8.7
PGK1-201ENST00000373316 GSPT2Q8IYD1 628 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 C2orf69Q8N8R5 385 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 ARMC2Q8NEN0 867 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 TRIM54Q9BYV2 358 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 CCDC134Q9H6E4 229 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 XPO7Q9UIA9 1087 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 HACL1Q9UJ83 578 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 HOXB8P17481 243 aaPredicted RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 GRK2P25098 689 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 PPM1FP49593 454 aaPredicted RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 OCRLQ01968 901 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 PRKCEQ02156 737 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 AP1B1Q10567 949 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 PTK6Q13882 451 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 SPOUT1Q5T280 376 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 APPL2Q8NEU8 664 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 USP13Q92995 863 aaPredicted RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 BTBD6Q96KE9 485 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 SH3GL3Q99963 347 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 ANKZF1Q9H8Y5 726 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 ERAP1Q9NZ08 941 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 RGL1Q9NZL6 768 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 MAGEB16A2A368 324 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 TGFB3P10600 412 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 CARSP49589 748 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 ITGA8P53708 1063 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 MRPS25P82663 173 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 KLC1Q07866 573 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 KYNUQ16719 465 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 GRAMD1BQ3KR37 738 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 PPP6R3Q5H9R7 873 aaPredicted RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 WASHC2DQ5SRD0 308 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
PGK1-201ENST00000373316 SPATA20Q8TB22 786 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 DDI1Q8WTU0 396 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 KCNH7Q9NS40 1196 aa11.08□□□□□ -0.64
PGK1-201ENST00000373316 CARNS1A5YM72 827 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 ANXA9O76027 345 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 YBX3P16989 372 aaKnown RBP eCLIP11.07□□□□□ -0.646e-13■■□□□ 12.8
PGK1-201ENST00000373316 RAD23BP54727 409 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 HYIQ5T013 277 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 LRRC38Q5VT99 294 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 CAPRIN2Q6IMN6 1127 aaKnown RBP11.07□□□□□ -0.64
PGK1-201ENST00000373316 SUGP1Q8IWZ8 645 aaKnown RBP11.07□□□□□ -0.64
PGK1-201ENST00000373316 MYCBPAPQ8TBZ2 947 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 SPDL1Q96EA4 605 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 GOLPH3Q9H4A6 298 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 PCDH9Q9HC56 1237 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 SORCS3Q9UPU3 1222 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 SNX5Q9Y5X3 404 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 TMEM120BA0PK00 339 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 RPSAP08865 295 aaKnown RBP11.07□□□□□ -0.64
PGK1-201ENST00000373316 HOXD10P28358 340 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 SLC20A2Q08357 652 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 SPP2Q13103 211 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 BMT2Q1RMZ1 405 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 CLEC16AQ2KHT3 1053 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 ATF7IP2Q5U623 682 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 MOB2Q70IA6 237 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 ZC3H18Q86VM9 953 aaKnown RBP11.07□□□□□ -0.64
PGK1-201ENST00000373316 ZNF398Q8TD17 642 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 TNFRSF25Q93038 417 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 LRRC39Q96DD0 335 aa11.07□□□□□ -0.64
PGK1-201ENST00000373316 P2RX7Q99572 595 aaKnown RBP11.07□□□□□ -0.64
PGK1-201ENST00000373316 GPBP1L1Q9HC44 474 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms