RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 EXOC7Q9UPT5 735 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 YY1P25490 414 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 SERPINB4P48594 390 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 WNT7BP56706 349 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 PDCD2Q16342 344 aaPredicted RBP14.39□□□□□ -0.11
USP49-201ENST00000373006 BRDTQ58F21 947 aaPredicted RBP14.39□□□□□ -0.11
USP49-201ENST00000373006 FBXO27Q8NI29 283 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 SH3TC2Q8TF17 1288 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 BICD1Q96G01 975 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 MFSD14AQ96MC6 490 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 IWS1Q96ST2 819 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 IDI2Q9BXS1 227 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 MRPL47Q9HD33 250 aaKnown RBP14.39□□□□□ -0.11
USP49-201ENST00000373006 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.39□□□□□ -0.11
USP49-201ENST00000373006 PCDHB4Q9Y5E5 795 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 ASTN2O75129 1339 aaPredicted RBP14.39□□□□□ -0.11
USP49-201ENST00000373006 FAM237BA0A1B0GVD1 139 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 GDF10P55107 478 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 EFHC2Q5JST6 749 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 ARHGAP22Q7Z5H3 698 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 PPFIBP2Q8ND30 876 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 FAM111AQ96PZ2 611 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 SYNCQ9H7C4 482 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 RPS6KL1Q9Y6S9 549 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 LTBP4Q8N2S1 1624 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 BGNP21810 368 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 GNA15P30679 374 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 NEK3P51956 506 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 NOMO3P69849 1222 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 DMP1Q13316 513 aaPredicted RBP14.38□□□□□ -0.11
USP49-201ENST00000373006 CUL3Q13618 768 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 BBS9Q3SYG4 887 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 WDR44Q5JSH3 913 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 ALYREFQ86V81 257 aaKnown RBP14.38□□□□□ -0.11
USP49-201ENST00000373006 MAP4K3Q8IVH8 894 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 MFN1Q8IWA4 741 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 FBXO36Q8NEA4 188 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 FEZF2Q8TBJ5 459 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 FGD4Q96M96 766 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 SENP7Q9BQF6 1050 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 OCEL1Q9H607 264 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 AHDC1Q5TGY3 1603 aaPredicted RBP14.38□□□□□ -0.11
USP49-201ENST00000373006 ANKRD33BA6NCL7 494 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 NFIBO00712 420 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 RNF8O76064 485 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 MYL2P10916 166 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 PGM1P36871 562 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 NRLP54845 237 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 OCRLQ01968 901 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 SCARA3Q6AZY7 606 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 PALM2Q8IXS6 379 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 RCOR2Q8IZ40 523 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 LARGE2Q8N3Y3 721 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 BANPQ8N9N5 519 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 TMC2Q8TDI7 906 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 FAM161BQ96MY7 647 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 UBE2OQ9C0C9 1292 aaKnown RBP14.38□□□□□ -0.11
USP49-201ENST00000373006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.38□□□□□ -0.11
USP49-201ENST00000373006 KRT82Q9NSB4 513 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 GINM1Q9NU53 330 aa14.38□□□□□ -0.11
USP49-201ENST00000373006 RPL26L1Q9UNX3 145 aaKnown RBP14.38□□□□□ -0.11
USP49-201ENST00000373006 TCRBV7S3A2A0A539 114 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 LPXNO60711 386 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 ACOT2P49753 483 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 ARL4CP56559 192 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 CCDC142Q17RM4 750 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 CCDC62Q6P9F0 684 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 SPOCD1Q6ZMY3 1216 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 CLPTM1LQ96KA5 538 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 MCEEQ96PE7 176 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 WDR83Q9BRX9 315 aaKnown RBP14.37□□□□□ -0.11
USP49-201ENST00000373006 NMUR2Q9GZQ4 415 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 ST6GALNAC4Q9H4F1 302 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
USP49-201ENST00000373006 MAP3K7O43318 606 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 HLA-DRAP01903 254 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 VCPP55072 806 aaKnown RBP14.37□□□□□ -0.11
USP49-201ENST00000373006 MTMR1Q13613 665 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 TKFCQ3LXA3 575 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 PLEKHA7Q6IQ23 1121 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 ABRAQ8N0Z2 381 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 CPXCR1Q8N123 301 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 GPD1LQ8N335 351 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 PRMT6Q96LA8 375 aaPredicted RBP14.37□□□□□ -0.11
USP49-201ENST00000373006 TCEAL9Q9UHQ7 104 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 PCNTO95613 3336 aa14.37□□□□□ -0.11
USP49-201ENST00000373006 B2RBV5 119 aa14.36□□□□□ -0.11
USP49-201ENST00000373006 H3BRJ5 948 aa14.36□□□□□ -0.11
USP49-201ENST00000373006 PLSCR1O15162 318 aa14.36□□□□□ -0.11
USP49-201ENST00000373006 HNRNPCL1O60812 293 aaKnown RBP14.36□□□□□ -0.11
USP49-201ENST00000373006 MT-ND3P03897 115 aa14.36□□□□□ -0.11
USP49-201ENST00000373006 DLDP09622 509 aaKnown RBP14.36□□□□□ -0.11
USP49-201ENST00000373006 PSMC5P62195 406 aa14.36□□□□□ -0.11
USP49-201ENST00000373006 CDK16Q00536 496 aa14.36□□□□□ -0.11
USP49-201ENST00000373006 OASLQ15646 514 aaKnown RBP14.36□□□□□ -0.11
USP49-201ENST00000373006 SMTNL2Q2TAL5 461 aa14.36□□□□□ -0.11
USP49-201ENST00000373006 SPDYAQ5MJ70 313 aa14.36□□□□□ -0.11
USP49-201ENST00000373006 ADGRD1Q6QNK2 874 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms