RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 DENND2CQ68D51 928 aa14.15□□□□□ -0.14
CSTF2-201ENST00000372972 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
CSTF2-201ENST00000372972 ARFGAP2Q8N6H7 521 aa14.15□□□□□ -0.14
CSTF2-201ENST00000372972 SNF8Q96H20 258 aa14.15□□□□□ -0.14
CSTF2-201ENST00000372972 SLITRK1Q96PX8 696 aa14.15□□□□□ -0.14
CSTF2-201ENST00000372972 TWNKQ96RR1 684 aa14.15□□□□□ -0.14
CSTF2-201ENST00000372972 GCOM2Q9BZD3 368 aaPredicted RBP14.15□□□□□ -0.14
CSTF2-201ENST00000372972 DDX56Q9NY93 547 aaKnown RBP14.15□□□□□ -0.14
CSTF2-201ENST00000372972 BCCIPQ9P287 314 aaKnown RBP eCLIP14.15□□□□□ -0.14
CSTF2-201ENST00000372972 WDR35Q9P2L0 1181 aa14.15□□□□□ -0.14
CSTF2-201ENST00000372972 CYTH4Q9UIA0 394 aa14.15□□□□□ -0.14
CSTF2-201ENST00000372972 EIF3HO15372 352 aaKnown RBP eCLIP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 VDRP11473 427 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 TCF4P15884 667 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 FGFR4P22455 802 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 RFC1P35251 1148 aaPredicted RBP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 ORC1Q13415 861 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 ZNF268Q14587 947 aaPredicted RBP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 CNGA2Q16280 664 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 ODF2Q5BJF6 829 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 ANKS1BQ7Z6G8 1248 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 TTC39CQ8N584 583 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 CCDC114Q96M63 670 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 HEXIM2Q96MH2 286 aaKnown RBP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 ARHGAP39Q9C0H5 1083 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 SEMA4AQ9H3S1 761 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 PLEKHA5Q9HAU0 1116 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 HMGXB4Q9UGU5 601 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 BARX2Q9UMQ3 279 aaPredicted RBP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 MGAMO43451 1857 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 PI4K2BG5E9Z4 385 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 GOLGA8SH3BPF8 625 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 TJP3O95049 919 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 HMGCRP04035 888 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 KRT1P04264 644 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 SMIM10L2AP0DMW4 78 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 SMIM10L2BP0DMW5 78 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 IVDP26440 423 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 HOXA11P31270 313 aaPredicted RBP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 GSCP56915 257 aaPredicted RBP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 PSMC1P62191 440 aaKnown RBP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 CAV1Q03135 178 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 LMNB2Q03252 620 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 SLC29A2Q14542 456 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 HOOK3Q86VS8 718 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 CPXM1Q96SM3 734 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 FAM49AQ9H0Q0 323 aaPredicted RBP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 TSPYL1Q9H0U9 437 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 SYNCQ9H7C4 482 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 KIAA1257Q9ULG3 409 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.14□□□□□ -0.15
CSTF2-201ENST00000372972 GINS2Q9Y248 185 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 DERAQ9Y315 318 aa14.14□□□□□ -0.15
CSTF2-201ENST00000372972 GRIN2DO15399 1336 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 SMIM35A0A1B0GVV1 85 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 TP73O15350 636 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 GPR32O75388 356 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 MICAL2O94851 1124 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 NPTXRO95502 500 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 F2P00734 622 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 PSMA2P25787 234 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 PTPN7P35236 360 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 PSMC4P43686 418 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 TMEM62Q0P6H9 643 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 INCA1Q0VD86 236 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 MYO1EQ12965 1108 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 PCBP1Q15365 356 aaKnown RBP eCLIP14.13□□□□□ -0.15
CSTF2-201ENST00000372972 TTC19Q6DKK2 380 aaPredicted RBP14.13□□□□□ -0.15
CSTF2-201ENST00000372972 SLC27A1Q6PCB7 646 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 MFSD7Q6UXD7 560 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 CATSPER4Q7RTX7 472 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 POLNQ7Z5Q5 900 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 XYLT1Q86Y38 959 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 FNIP1Q8TF40 1166 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 PPP1R13LQ8WUF5 828 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 KAT2BQ92831 832 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 KLHL11Q9NVR0 708 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 NEU2Q9Y3R4 380 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 AOC2O75106 756 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 SHBGP04278 402 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 KRT10P13645 584 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 ATF2P15336 505 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 HPDP32754 393 aaPredicted RBP14.13□□□□□ -0.15
CSTF2-201ENST00000372972 ADCY8P40145 1251 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 GABRB2P47870 512 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 FCGRTP55899 365 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 PDCLQ13371 301 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 KAZNQ674X7 775 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 RHBDF2Q6PJF5 856 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 SPOCD1Q6ZMY3 1216 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 ZNF365Q70YC5 407 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 TRMT10CQ7L0Y3 403 aaKnown RBP14.13□□□□□ -0.15
CSTF2-201ENST00000372972 CROCCP2Q86T23 111 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 CCDC89Q8N998 374 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 AP5M1Q9H0R1 490 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 CDHR5Q9HBB8 845 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 TJP2Q9UDY2 1190 aa14.13□□□□□ -0.15
CSTF2-201ENST00000372972 NOVA2Q9UNW9 492 aaKnown RBP14.13□□□□□ -0.15
CSTF2-201ENST00000372972 KAT6AQ92794 2004 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms