RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ASPRV1Q53RT3 343 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 RALGPS1Q5JS13 557 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 KCNT1Q5JUK3 1230 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SPDYCQ5MJ68 293 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SYDE2Q5VT97 1194 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 TRIM74Q86UV6 250 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 TRIM73Q86UV7 250 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SIAH1Q8IUQ4 282 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF276Q8N554 614 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 TEX9Q8N6V9 391 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 KLHL23Q8NBE8 558 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 GSTCDQ8NEC7 633 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 WDR66Q8TBY9 1149 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 GATA6Q92908 595 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 MOCOSQ96EN8 888 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PTCD3Q96EY7 689 aaKnown RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SERAC1Q96JX3 654 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PANX3Q96QZ0 392 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SMC6Q96SB8 1091 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SLX1AQ9BQ83 275 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 C20orf27Q9GZN8 174 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 WNT8AQ9H1J5 351 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 DCLRE1BQ9H816 532 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 CYLDQ9NQC7 956 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 WHRNQ9P202 907 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PCDHGC3Q9UN70 934 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF148Q9UQR1 794 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SLC4A7Q9Y6M7 1214 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SPATA31A5Q5VU36 1347 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SPATA31A7Q8IWB4 1347 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 DDTLA6NHG4 134 aaPredicted RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 TXNDC9O14530 226 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 LCE2BO14633 110 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SLC16A3O15427 465 aaKnown RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 UGT1A9O60656 530 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 OPHN1O60890 802 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 WFS1O76024 890 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 EYA4O95677 639 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 HARSP12081 509 aaKnown RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 NELFEP18615 380 aaKnown RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 PGM1P36871 562 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 ALDH18A1P54886 795 aaKnown RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SLC25A3Q00325 362 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SLC34A1Q06495 639 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 NCOA4Q13772 614 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 PTK6Q13882 451 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 ACAP1Q15027 740 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF394Q53GI3 561 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SFT2D3Q587I9 215 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 PLA2G4FQ68DD2 849 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 RIPOR1Q6ZS17 1223 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 NLRX1Q86UT6 975 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 ANKRD35Q8N283 1001 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 DRAXINQ8NBI3 349 aaPredicted RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 RBM15BQ8NDT2 890 aaKnown RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 CFAP61Q8NHU2 1237 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 PGLYRP2Q96PD5 576 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 HSD17B14Q9BPX1 270 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 EBF4Q9BQW3 602 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 BTBD10Q9BSF8 475 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 TRAIPQ9BWF2 469 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 UNC45AQ9H3U1 944 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 UGT1A7Q9HAW7 530 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 UGT1A10Q9HAW8 530 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 UGT1A8Q9HAW9 530 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 CYP4F11Q9HBI6 524 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 GINM1Q9NU53 330 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 DMAC2Q9NW81 257 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SERPINB13Q9UIV8 391 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 FCF1Q9Y324 198 aaKnown RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 CLUHO75153 1309 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 MAGEA13PA6NCF6 341 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 F8VP50 259 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 PIK3R2O00459 728 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 FCHO1O14526 889 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 GFRA3O60609 400 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 DCTN3O75935 186 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 BCRP11274 1271 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 ESRRAP11474 423 aaPredicted RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 ECE1P42892 770 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 MAGEA8P43361 318 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 MXI1P50539 228 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 MMP16P51512 607 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 EPHB1P54762 984 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 BPIFB4P59827 614 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SP4Q02446 784 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 DLG1Q12959 904 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 DGKZQ13574 1117 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 BMPR2Q13873 1038 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 LBRQ14739 615 aaKnown RBP5.7□□□□□ -1.5
ATG4A-204ENST00000372246 BMT2Q1RMZ1 405 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 FAM219BQ5XKK7 198 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 SLFN13Q68D06 897 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 IRGCQ6NXR0 463 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 MFSD7Q6UXD7 560 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 PPP1R21Q6ZMI0 780 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 OTOP1Q7RTM1 612 aa5.7□□□□□ -1.5
ATG4A-204ENST00000372246 CRYGNQ8WXF5 182 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms