RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 MAP3K7CLP57077 242 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 TFDP1Q14186 410 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 TRIM25Q14258 630 aaKnown RBP12.31□□□□□ -0.44
PTPN1-201ENST00000371621 NAALADL2Q58DX5 795 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 C1QTNF12Q5T7M4 302 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 CCNYL1Q8N7R7 359 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 COX4I2Q96KJ9 171 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 DACH2Q96NX9 599 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 ORAI2Q96SN7 254 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 PAFAH2Q99487 392 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 PPM1HQ9ULR3 514 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 RABL2BQ9UNT1 228 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 ZNF652Q9Y2D9 606 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 CARD8Q9Y2G2 431 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 MYH8P13535 1937 aa12.31□□□□□ -0.44
PTPN1-201ENST00000371621 TCRBV7S2A1N4TA0A589 114 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 GNGT2O14610 69 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 WEE2P0C1S8 567 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 MYBP10242 640 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 NR1H2P55055 460 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 BFSP2Q13515 415 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 MYBPC2Q14324 1141 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 IL17AQ16552 155 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 C6orf52Q5T4I8 152 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 HGSNATQ68CP4 663 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 C11orf63Q6NUN7 778 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 ADCK1Q86TW2 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L15C9J2P7 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L13C9JLJ4 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 ANKRD63C9JTQ0 380 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L11C9JVI0 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L18D6R9N7 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L22D6RA61 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L17D6RBQ6 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L19D6RCP7 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L20D6RJB6 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 BANF1O75531 89 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 BCL10O95999 233 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 C6orf222P0C671 652 aaPredicted RBP12.3□□□□□ -0.44
PTPN1-201ENST00000371621 FECHP22830 423 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 HOXD12P35452 270 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 PPARGP37231 505 aaPredicted RBP12.3□□□□□ -0.44
PTPN1-201ENST00000371621 USP17L24Q0WX57 530 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 BMPR2Q13873 1038 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 PDK4Q16654 411 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 CITED4Q96RK1 184 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 PARVGQ9HBI0 331 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 J3QRK9 145 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 DCXO43602 365 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 RNASEH1O60930 286 aaKnown RBP12.3□□□□□ -0.44
PTPN1-201ENST00000371621 ZNF24P17028 368 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 GM2AP17900 193 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 ENTPD1P49961 510 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 KLRC3Q07444 240 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 IL31Q6EBC2 164 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 OR52E8Q6IFG1 317 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 PRR23CQ6ZRP0 262 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 C14orf80Q86SX3 495 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 FBXL8Q96CD0 374 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 TTYH3Q9C0H2 523 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 KIAA1586Q9HCI6 787 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 ACP6Q9NPH0 428 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 AP4S1Q9Y587 144 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 HEY1Q9Y5J3 304 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 EMSYQ7Z589 1322 aa12.3□□□□□ -0.44
PTPN1-201ENST00000371621 PRR5-ARHGAP8B1AHC4 643 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 NFIBO00712 420 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 C2CD2LO14523 706 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 KLRC4O43908 158 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 NR4A1P22736 598 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 ARHGAP8P85298 464 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 TROAPQ12815 778 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 LSAMPQ13449 338 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 EML3Q32P44 896 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 VSTM1Q6UX27 236 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 PPP4R3CPQ6ZMV5 832 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 ACAD11Q709F0 780 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 BNIPLQ7Z465 357 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 ZC3H15Q8WU90 426 aaKnown RBP12.29□□□□□ -0.44
PTPN1-201ENST00000371621 SDCCAG3Q96C92 435 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 IL1RL2Q9HB29 575 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 LRRC4BQ9NT99 713 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 TEKT2Q9UIF3 430 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
PTPN1-201ENST00000371621 PDGFRBP09619 1106 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 ZBTB49Q6ZSB9 765 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 HELQQ8TDG4 1101 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 CEP44Q9C0F1 390 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 DNAJC18Q9H819 358 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 TIMMDC1Q9NPL8 285 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 SNX5Q9Y5X3 404 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 SAC3D1A6NKF1 404 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms