RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 TNFSF4P23510 183 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 PPP5CP53041 499 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 SMTNP53814 917 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 HUNKP57058 714 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 BEX3Q00994 111 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 DNM1Q05193 864 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 FUT11Q495W5 492 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 ZCWPW2Q504Y3 356 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 SNX30Q5VWJ9 437 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 ABHD17CQ6PCB6 329 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 ANKRD35Q8N283 1001 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 PPM1NQ8N819 430 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 GATAD2BQ8WXI9 593 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 TBCBQ99426 244 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 TTC1Q99614 292 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 HERC2P3Q9BVR0 1158 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 DEF6Q9H4E7 631 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 EXOC1Q9NV70 894 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 TAS2R3Q9NYW6 316 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 PIM2Q9P1W9 311 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 USP36Q9P275 1121 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 POLR3KQ9Y2Y1 108 aaPredicted RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 A6NHS1 94 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 C6orf229H3BNL8 230 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 DAB1O75553 588 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 LAG3P18627 525 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 ATP5F1P24539 256 aaPredicted RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 ATP5DP30049 168 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 GSTT1P30711 240 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 NRG1Q02297 640 aaPredicted RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 PPP2R3AQ06190 1150 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 MPP2Q14168 576 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 CENPPQ6IPU0 288 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 IKBIPQ70UQ0 350 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 DNAJC5GQ8N7S2 189 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 GOLM1Q8NBJ4 401 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 DHTKD1Q96HY7 919 aaPredicted RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 PIWIL1Q96J94 861 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 IQCGQ9H095 443 aaKnown RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 VPS11Q9H270 941 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 BRD9Q9H8M2 597 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 VPS45Q9NRW7 570 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 TBC1D14Q9P2M4 693 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 UBA2Q9UBT2 640 aaPredicted RBP4.2□□□□□ -1.74
MCF2-203ENST00000370576 CLIC4Q9Y696 253 aa4.2□□□□□ -1.74
MCF2-203ENST00000370576 H7BY64 318 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 PSMD14O00487 310 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 CSPG5O95196 566 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 POLR3DP05423 398 aaPredicted RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 RB1P06400 928 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 SLC3A2P08195 630 aaKnown RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 MAPTP10636 758 aaKnown RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 FGFR1P11362 822 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 GCFC2P16383 781 aaKnown RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 CALML3P27482 149 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 ICAM3P32942 547 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 SEC24CP53992 1094 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 RAC3P60763 192 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 CXCL9Q07325 125 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 BFSP1Q12934 665 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 PTPRNQ16849 979 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 PRICKLE4Q2TBC4 344 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 LPCAT2Q7L5N7 544 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 DEFB132Q7Z7B7 95 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 SPATA24Q86W54 205 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 TMEM139Q8IV31 216 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 LRRC47Q8N1G4 583 aaKnown RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 DENND6BQ8NEG7 585 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.19□□□□□ -1.74
MCF2-203ENST00000370576 UTP15Q8TED0 518 aaKnown RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 ANKRD7Q92527 254 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 LPAR1Q92633 364 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 SLC5A5Q92911 643 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 TRIM11Q96F44 468 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 ZNF764Q96H86 408 aaPredicted RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 BTBD1Q9H0C5 482 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 INTS10Q9NVR2 710 aaKnown RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 SERPINB13Q9UIV8 391 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 BOLA1Q9Y3E2 137 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 SPO11Q9Y5K1 396 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 A0A1W2PRG0 241 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 GOLGA8BA8MQT2 603 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 ENC1O14682 589 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 KINO60870 393 aaKnown RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 CNMDO75829 334 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 SRGAP2CP0DJJ0 459 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 TGM1P22735 817 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 SERPINF1P36955 418 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 GSCP56915 257 aaPredicted RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 HTRA4P83105 476 aaPredicted RBP4.19□□□□□ -1.74
MCF2-203ENST00000370576 CENPCQ03188 943 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 NFIAQ12857 509 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 ASIC2Q16515 512 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 GNPTABQ3T906 1256 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 FAM26FQ5R3K3 315 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 OR7E24Q6IFN5 339 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 RAB12Q6IQ22 244 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 LILRA6Q6PI73 481 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 C11orf88Q6PI97 169 aa4.19□□□□□ -1.74
MCF2-203ENST00000370576 CCDC186Q7Z3E2 898 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms