RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 SGO2Q562F6 1265 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 PPP1R15BQ5SWA1 713 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 ZNF572Q7Z3I7 529 aaPredicted RBP14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 SYCE1Q8N0S2 351 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 USP38Q8NB14 1042 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 CAGE1Q8TC20 777 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 HASPINQ8TF76 798 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 TSPAN18Q96SJ8 248 aa14.95□□□□□ -0.02
HMGCS2-201ENST00000369406 XPOTO43592 962 aaKnown RBP14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 MYBL1P10243 752 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 HSPA8P11142 646 aaKnown RBP14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 GATMP50440 423 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 CNGA2Q16280 664 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 TRIM60Q495X7 471 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 SV2CQ496J9 727 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 LCLAT1Q6UWP7 414 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 ZNF280BQ86YH2 543 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 ADGRF2Q8IZF7 708 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 DBF4BQ8NFT6 615 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 GOLGA1Q92805 767 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 PNKPQ96T60 521 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 RBM12Q9NTZ6 932 aaKnown RBP14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 A8MXQ7 604 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 CYB561D2O14569 222 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 PEX5P50542 639 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 RBM10P98175 930 aaKnown RBP14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 FAAP100Q0VG06 881 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 PDCLQ13371 301 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 SLC39A5Q6ZMH5 540 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 APPL2Q8NEU8 664 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 JOSD2Q8TAC2 188 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 UBXN4Q92575 508 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 VWCEQ96DN2 955 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 VCPIP1Q96JH7 1222 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 SENP8Q96LD8 212 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 HCSTQ9UBK5 93 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 NR2E1Q9Y466 385 aa14.94□□□□□ -0.02
HMGCS2-201ENST00000369406 RHOXF2BP0C7M4 288 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 GNL1P36915 607 aaPredicted RBP14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 PNPLA4P41247 253 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 BRCC3P46736 316 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 FAM189BP81408 668 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 TIGD5Q53EQ6 642 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 ERICH1Q86X53 443 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 XYLT1Q86Y38 959 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 SPATA4Q8NEY3 305 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 HINFPQ9BQA5 517 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 RHOXF2Q9BQY4 288 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 GOLGA8SH3BPF8 625 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 MED7O43513 233 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 CEP104O60308 925 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 DDHD2O94830 711 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 RGS7P49802 495 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 RABGGTBP53611 331 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 CCL23P55773 120 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 TAS2R40P59535 323 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 PLEKHG4Q58EX7 1191 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 PMF1Q6P1K2 205 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 HACE1Q8IYU2 909 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 TRIM11Q96F44 468 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 MCEEQ96PE7 176 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 PPP1R12CQ9BZL4 782 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 ZNF518BQ9C0D4 1074 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 SLC38A7Q9NVC3 462 aa14.93□□□□□ -0.02
HMGCS2-201ENST00000369406 TMEM191CA6NGB0 347 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 COL6A1P12109 1028 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 WARSP23381 471 aaKnown RBP14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 ADORA2BP29275 332 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 CYP2C18P33260 490 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 TLE2Q04725 743 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 LIN9Q5TKA1 542 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 TRNP1Q6NT89 227 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 FBXO38Q6PIJ6 1188 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 SLC24A5Q71RS6 500 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 ZDHHC14Q8IZN3 488 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 TOP6BLQ8N6T0 577 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 HDAC7Q8WUI4 952 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 RTP3Q9BQQ7 232 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 GABRDO14764 452 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 INPPL1O15357 1258 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 HUS1O60921 280 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 AARSP49588 968 aaKnown RBP eCLIP14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 LLGL1Q15334 1064 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 UNC93AQ86WB7 457 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 CRYBG2Q8N1P7 616 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 COL4A6Q14031 1691 aa14.92□□□□□ -0.02
HMGCS2-201ENST00000369406 E5RJQ4 531 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 CLDN5O00501 218 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 ENPP3O14638 875 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 CALB1P05937 261 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 CKAP4Q07065 602 aaKnown RBP14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 GRIK3Q13003 919 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 RAB6CQ53S08 254 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 DNAJC24Q6P3W2 148 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PAQR9Q6ZVX9 377 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 ANKRD33Q7Z3H0 272 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 ANKS1BQ7Z6G8 1248 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 RASGEF1CQ8N431 466 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 EMC1Q8N766 993 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms