RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 MAP4K3Q8IVH8 894 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 GPD1LQ8N335 351 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 RBBP8NLQ8NC74 664 aaPredicted RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 ASAP3Q8TDY4 903 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 TMEM174Q8WUU8 243 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 SYT15Q9BQS2 421 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 SENP1Q9P0U3 644 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 FBXO40Q9UH90 709 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 GJB1P08034 283 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 LMNB2Q03252 620 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 CCDC6Q16204 474 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 RNF220Q5VTB9 566 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 KIAA0319LQ8IZA0 1049 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 SCYL3Q8IZE3 742 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 DNAJC9Q8WXX5 260 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 SHCBP1LQ9BZQ2 653 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 POLR3FQ9H1D9 316 aaPredicted RBP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 HEY2Q9UBP5 337 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 PSTPIP1O43586 416 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 MARK3P27448 753 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 IL1R2P27930 398 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 PTPN4P29074 926 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 BASP1P80723 227 aaKnown RBP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 MRPS35P82673 323 aaKnown RBP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 PTP4A2Q12974 167 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 KPNB1Q14974 876 aaKnown RBP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 USP37Q86T82 979 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 ALYREFQ86V81 257 aaKnown RBP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 TDRPQ86YL5 185 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 ENDOVQ8N8Q3 282 aaKnown RBP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 FAM71DQ8N9W8 422 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 PGLYRP2Q96PD5 576 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 FAM111AQ96PZ2 611 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 PCDHB2Q9Y5E7 798 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 CYB561D2O14569 222 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 DNALI1O14645 258 aaPredicted RBP13.56□□□□□ -0.24
CHD1L-202ENST00000369258 GRAP2O75791 330 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 DLGAP5Q15398 846 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 WDR44Q5JSH3 913 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 JOSD2Q8TAC2 188 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 NRG4Q8WWG1 115 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 SLITRK1Q96PX8 696 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 WASF2Q9Y6W5 498 aa13.56□□□□□ -0.24
CHD1L-202ENST00000369258 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 FAM237BA0A1B0GVD1 139 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 UGT1A9O60656 530 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 TMEM63AO94886 807 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 TROVE2P10155 538 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHD1L-202ENST00000369258 ACO1P21399 889 aaKnown RBP13.55□□□□□ -0.24
CHD1L-202ENST00000369258 BGNP21810 368 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 SLC18A1P54219 525 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 CDH8P55286 799 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 PRKG1Q13976 671 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 LRRC36Q1X8D7 754 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 SLC45A4Q5BKX6 768 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 UNC45BQ8IWX7 931 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 KATNAL2Q8IYT4 538 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 EFCAB3Q8N7B9 438 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 FBXO36Q8NEA4 188 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 ACTL9Q8TC94 416 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 ZNF606Q8WXB4 792 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 TFAP2BQ92481 460 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 SH3GL3Q99963 347 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 ST6GALNAC4Q9H4F1 302 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 DCLRE1BQ9H816 532 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 UGT1A7Q9HAW7 530 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 UGT1A10Q9HAW8 530 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 UGT1A8Q9HAW9 530 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 RNF19AQ9NV58 838 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 NXF1Q9UBU9 619 aaKnown RBP13.55□□□□□ -0.24
CHD1L-202ENST00000369258 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 ATP2A1O14983 1001 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 SMIM24O75264 130 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 RFC1P35251 1148 aaPredicted RBP13.55□□□□□ -0.24
CHD1L-202ENST00000369258 RFC5P40937 340 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 OTUD4Q01804 1114 aaKnown RBP13.55□□□□□ -0.24
CHD1L-202ENST00000369258 KLC1Q07866 573 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 RCN1Q15293 331 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 ENOSF1Q7L5Y1 443 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 TTLL6Q8N841 843 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 EXD1Q8NHP7 514 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 HSPH1Q92598 858 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 ATG4CQ96DT6 458 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 MFSD14AQ96MC6 490 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 TCHPQ9BT92 498 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 CADM1Q9BY67 442 aaKnown RBP13.55□□□□□ -0.24
CHD1L-202ENST00000369258 MTMR12Q9C0I1 747 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 RBAKQ9NYW8 714 aaPredicted RBP13.55□□□□□ -0.24
CHD1L-202ENST00000369258 TMOD2Q9NZR1 351 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 AGTPBP1Q9UPW5 1226 aa13.55□□□□□ -0.24
CHD1L-202ENST00000369258 LTBP1Q14766 1721 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms