RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 LCP1P13796 627 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 CHKAP35790 457 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 PSMC4P43686 418 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 SLC12A2P55011 1212 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 CDH8P55286 799 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 QPCTQ16769 361 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 LY6KQ17RY6 165 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 ANKRD20A8PQ5CZ79 823 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 FKBP1CQ5VVH2 108 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 SPOCD1Q6ZMY3 1216 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 HIPK4Q8NE63 616 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 CHST13Q8NET6 341 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 FBXO41Q8TF61 875 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 BSNDQ8WZ55 320 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 ETAA1Q9NY74 926 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 ITGB4P16144 1822 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
COL20A1-201ENST00000358894 PIAS1O75925 651 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 PDGFRBP09619 1106 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 HSD17B4P51659 736 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 AUHQ13825 339 aaKnown RBP12.85□□□□□ -0.35
COL20A1-201ENST00000358894 PDZD4Q76G19 769 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-201ENST00000358894 TRIM42Q8IWZ5 723 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 C3orf20Q8ND61 904 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 ASAP3Q8TDY4 903 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 ACAP3Q96P50 834 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 DMAC2Q9NW81 257 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 ADAMTS7Q9UKP4 1686 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 SHOX2O60902 331 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 CYP1A2P05177 515 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 CXCL8P10145 99 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 PECAM1P16284 738 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 RPS12P25398 132 aaKnown RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 TMEM132DQ14C87 1099 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 MAP7D1Q3KQU3 841 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 TDRD10Q5VZ19 366 aaKnown RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 HEATR6Q6AI08 1181 aaKnown RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 ZNF572Q7Z3I7 529 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 CCDC97Q96F63 343 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 SMARCAD1Q9H4L7 1026 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 WDR35Q9P2L0 1181 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 ANP32DO95626 131 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 ETS1P14921 441 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 SESN2P58004 480 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 FBXO16Q8IX29 292 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 STAMBPL1Q96FJ0 436 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 MYH15Q9Y2K3 1946 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 TIAM2Q8IVF5 1701 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 OPLAHO14841 1288 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 RPL7AP62424 266 aaKnown RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 TTC27Q6P3X3 843 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 CRLF3Q8IUI8 442 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 CEP70Q8NHQ1 597 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 ATXN7L3BQ96GX2 97 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 HPDLQ96IR7 371 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 NUDCD1Q96RS6 583 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 FOXP3Q9BZS1 431 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 GPATCH2LQ9NWQ4 482 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 ZC3H7BQ9UGR2 993 aaKnown RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 NCF2P19878 526 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 TARSP26639 723 aaKnown RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 PTGER2P43116 358 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 PTK7Q13308 1070 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 LAMB3Q13751 1172 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 MDH1BQ5I0G3 518 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 SLFN11Q7Z7L1 901 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 DTX3LQ8TDB6 740 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 VPS11Q9H270 941 aa12.84□□□□□ -0.35
COL20A1-201ENST00000358894 AVENQ9NQS1 362 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 KLHL8Q9P2G9 620 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-201ENST00000358894 APOL1O14791 398 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 GARSP41250 739 aaKnown RBP12.83□□□□□ -0.36
COL20A1-201ENST00000358894 NCKAP1LP55160 1127 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
COL20A1-201ENST00000358894 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
COL20A1-201ENST00000358894 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 ERMARDQ5T6L9 678 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 ATG16L1Q676U5 607 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 NUDCD3Q8IVD9 361 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 PPIL6Q8IXY8 311 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 CHCHD3Q9NX63 227 aaKnown RBP12.83□□□□□ -0.36
COL20A1-201ENST00000358894 PHTF1Q9UMS5 762 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 FOXO6A8MYZ6 492 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 ATP5HO75947 161 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 GLRA2P23416 452 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 SERPINB6P35237 376 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 GCLCP48506 637 aaPredicted RBP12.83□□□□□ -0.36
COL20A1-201ENST00000358894 SH3BGRP55822 239 aaPredicted RBP12.83□□□□□ -0.36
COL20A1-201ENST00000358894 NME3Q13232 169 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 AMHR2Q16671 573 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 FBXO36Q8NEA4 188 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
COL20A1-201ENST00000358894 PTPRAP18433 802 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 SSTR1P30872 391 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 DRG2P55039 364 aaKnown RBP12.83□□□□□ -0.36
COL20A1-201ENST00000358894 COPS2P61201 443 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 RBP5P82980 135 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 ZNF200P98182 395 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms