RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ERP44Q9BS26 406 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 PAK6Q9NQU5 681 aaPredicted RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ZNHIT2Q9UHR6 403 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 FAF1Q9UNN5 650 aaPredicted RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 RPTORQ8N122 1335 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 GOLGA8TH3BQL2 631 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 GSC2O15499 205 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 TRMUO75648 421 aaKnown RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 CDR2Q01850 454 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 THOC5Q13769 683 aaKnown RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ACAP1Q15027 740 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 SFR1Q86XK3 245 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 GRAMD2AQ8IUY3 354 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 U2AF1L4Q8WU68 220 aaKnown RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 TANGO6Q9C0B7 1094 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 CCSER1Q9C0I3 900 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 SENP6Q9GZR1 1112 aaPredicted RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 NT5C3AQ9H0P0 336 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 FOXP1Q9H334 677 aaPredicted RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 KANSL2Q9H9L4 492 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 NLRC4Q9NPP4 1024 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 PTCH2Q9Y6C5 1203 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 COL11A1P12107 1806 aaPredicted RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 GJB1P08034 283 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 TCEA1P23193 301 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 BDNFP23560 247 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 CTGFP29279 349 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 PPP1R2P41236 205 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 CSE1LP55060 971 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 FCGRTP55899 365 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 POU5F1Q01860 360 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 HNRNPDQ14103 355 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 NR1D2Q14995 579 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 QRICH1Q2TAL8 776 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 TAF1BQ53T94 588 aaPredicted RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 PPP1R2P3Q6NXS1 205 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 MCF2L2Q86YR7 1114 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 USP6NLQ92738 828 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 SYMPKQ92797 1274 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 TUBGCP2Q9BSJ2 902 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 HOXC10Q9NYD6 342 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 PCDHA6Q9UN73 950 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 PCDHA8Q9Y5H6 950 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 NOTOA8MTQ0 251 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 TTC34A8MYJ7 566 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 PDHXO00330 501 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 BUD23O43709 281 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 ANPEPP15144 967 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 RILPL1Q5EBL4 403 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 WDR45BQ5MNZ6 344 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 SPOPLQ6IQ16 392 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 LRRC49Q8IUZ0 686 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 TBCKQ8TEA7 893 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 GFM2Q969S9 779 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 TRIM47Q96LD4 638 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 PITPNM3Q9BZ71 974 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 TRNAU1APQ9NX07 287 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 BARHL2Q9NY43 387 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 ZBTB21Q9ULJ3 1066 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 NR2E1Q9Y466 385 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 PCDHA1Q9Y5I3 950 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 NR2E3Q9Y5X4 410 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 ZNF536O15090 1300 aa9.78□□□□□ -0.84
SMARCAL1-202ENST00000358207 A0A1W2PQJ5 194 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 CFAP69A5D8W1 941 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 MAPK13O15264 365 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 TDP2O95551 362 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 EEF1GP26641 437 aaKnown RBP9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 GNA11P29992 359 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 HSD17B4P51659 736 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 C16orf72Q14CZ0 275 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 SFT2D3Q587I9 215 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 MAP3K21Q5TCX8 1036 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 TATDN1Q6P1N9 297 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 PAOXQ6QHF9 649 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 RAPH1Q70E73 1250 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 ACTRT2Q8TDY3 377 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 SPOCK2Q92563 424 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 OTUD5Q96G74 571 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 LIN28AQ9H9Z2 209 aaKnown RBP9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 SIAEQ9HAT2 523 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 VTA1Q9NP79 307 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 PPP1R9AQ9ULJ8 1098 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 TTC7AQ9ULT0 858 aaPredicted RBP9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 PCDHA4Q9UN74 947 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 NOC2LQ9Y3T9 749 aaKnown RBP9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 PCDHB2Q9Y5E7 798 aa9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.77□□□□□ -0.84
SMARCAL1-202ENST00000358207 A0A088AWK7 358 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 IGKV6D-41A0A0C4DH26 115 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 C19orf81C9J6K1 198 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 RASGRF2O14827 1237 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 SLC26A4O43511 780 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 XRCC5P13010 732 aaKnown RBP9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 OSBPP22059 807 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 BMP8BP34820 402 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 RPL5P46777 297 aaKnown RBP9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 POLR2FP61218 127 aaKnown RBP9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 CTAG1AP78358 180 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms