RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 KIAA2013Q8IYS2 634 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 PCDHB18PQ96TA0 734 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 SERPINI1Q99574 410 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 PALMDQ9NP74 551 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 PHTF1Q9UMS5 762 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 TRPM3Q9HCF6 1732 aaPredicted RBP14.73□□□□□ -0.05
SREBF1-202ENST00000355815 IGLV3-22A0A075B6J6 115 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 LDHAP00338 332 aaKnown RBP14.73□□□□□ -0.05
SREBF1-202ENST00000355815 PRKCBP05771 671 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 KRT3P12035 628 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 CA8P35219 290 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 BACE1P56817 501 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 ARHGAP22Q7Z5H3 698 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 MTDHQ86UE4 582 aaKnown RBP14.73□□□□□ -0.05
SREBF1-202ENST00000355815 CCNYL1Q8N7R7 359 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 KDM4CQ9H3R0 1056 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 FNDC3AQ9Y2H6 1198 aaKnown RBP14.73□□□□□ -0.05
SREBF1-202ENST00000355815 NUP98P52948 1817 aa14.73□□□□□ -0.05
SREBF1-202ENST00000355815 TXNP10599 105 aaKnown RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 RAP1GAPP47736 663 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 GPC3P51654 580 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 CDH8P55286 799 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 PTENP60484 403 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 SNX30Q5VWJ9 437 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 NLRP9Q7RTR0 991 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 CCDC125Q86Z20 511 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 ARID3BQ8IVW6 561 aaPredicted RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 CDC42EP4Q9H3Q1 356 aaKnown RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 MCM8Q9UJA3 840 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 COG5Q9UP83 839 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 PHRF1Q9P1Y6 1649 aaKnown RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 AKAP11Q9UKA4 1901 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 PRPSAP2O60256 369 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 PRKCIP41743 596 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 CYLC2Q14093 348 aaPredicted RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 HYIQ5T013 277 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 IQCKQ8N0W5 287 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 SDCCAG3Q96C92 435 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 FAM49BQ9NUQ9 324 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 ALS2Q96Q42 1657 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 VWA5AO00534 786 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 DGKIO75912 1065 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 GJB1P08034 283 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 CYP3A4P08684 503 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 ETS2P15036 469 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 RFX1P22670 979 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 MYL6P60660 151 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 DAB2P98082 770 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 CYP24A1Q07973 514 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 SPIRE1Q08AE8 756 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 AMHR2Q16671 573 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 QPCTQ16769 361 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 LY6KQ17RY6 165 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 ASTE1Q2TB18 679 aaPredicted RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 IZUMO2Q6UXV1 221 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 NUB1Q9Y5A7 615 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 GTPBP10A4D1E9 387 aaKnown RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 TRAPPC3O43617 180 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 P4HA1P13674 534 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 ENO3P13929 434 aaPredicted RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 CDH6P55285 790 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 PRPSAP1Q14558 356 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 EXT2Q93063 718 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 TMEM121Q9BTD3 319 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 MED10Q9BTT4 135 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 MRPL4Q9BYD3 311 aaKnown RBP14.72□□□□□ -0.05
SREBF1-202ENST00000355815 NEU2Q9Y3R4 380 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 PCDHA2Q9Y5H9 948 aa14.72□□□□□ -0.05
SREBF1-202ENST00000355815 LAMA4Q16363 1823 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 AIM2O14862 343 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 CST8O60676 142 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 PDE5AO76074 875 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 ZBED1O96006 694 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 TCF7P36402 384 aaPredicted RBP14.71□□□□□ -0.05
SREBF1-202ENST00000355815 NFX1Q12986 1120 aaKnown RBP14.71□□□□□ -0.05
SREBF1-202ENST00000355815 TFDP1Q14186 410 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 PCNX4Q63HM2 1172 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 MYLK4Q86YV6 388 aaPredicted RBP14.71□□□□□ -0.05
SREBF1-202ENST00000355815 PRELID2Q8N945 189 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 LRRN4Q8WUT4 740 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 ING2Q9H160 280 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 RANBP17Q9H2T7 1088 aaKnown RBP14.71□□□□□ -0.05
SREBF1-202ENST00000355815 CAAP1Q9H8G2 361 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 KIAA1586Q9HCI6 787 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 ANKEF1Q9NU02 776 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 PARVAQ9NVD7 372 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 PNMA3Q9UL41 463 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 CCNE2O96020 404 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 YWHAEP62258 255 aaKnown RBP14.71□□□□□ -0.05
SREBF1-202ENST00000355815 DDX28Q9NUL7 540 aaKnown RBP14.71□□□□□ -0.05
SREBF1-202ENST00000355815 AGAP1Q9UPQ3 857 aa14.71□□□□□ -0.05
SREBF1-202ENST00000355815 MAGEA13PA6NCF6 341 aa14.71□□□□□ -0.06
SREBF1-202ENST00000355815 TPP2P29144 1249 aaPredicted RBP14.71□□□□□ -0.06
SREBF1-202ENST00000355815 STAT4Q14765 748 aa14.71□□□□□ -0.06
SREBF1-202ENST00000355815 TAF1BQ53T94 588 aaPredicted RBP14.71□□□□□ -0.06
SREBF1-202ENST00000355815 C4orf19Q8IY42 314 aa14.71□□□□□ -0.06
SREBF1-202ENST00000355815 RYBPQ8N488 228 aaPredicted RBP14.71□□□□□ -0.06
SREBF1-202ENST00000355815 CNBD2Q96M20 576 aa14.71□□□□□ -0.06
SREBF1-202ENST00000355815 KREMEN1Q96MU8 473 aa14.71□□□□□ -0.06
SREBF1-202ENST00000355815 LRP6O75581 1613 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms