RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 CMTM5Q96DZ9 223 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 CYFIP2Q96F07 1278 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 SEPT5Q99719 369 aaPredicted RBP17.06■□□□□ 0.32
SHTN1-202ENST00000355371 CBWD1Q9BRT8 395 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 RABGAP1LQ5R372 815 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 LVRNQ6Q4G3 990 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 CCNJLQ8IV13 435 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 C3orf20Q8ND61 904 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 STAMBPL1Q96FJ0 436 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 WHRNQ9P202 907 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 CDY2AQ9Y6F7 541 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 CDY1Q9Y6F8 540 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 PXDNQ92626 1479 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 ANXA9O76027 345 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 ZBTB17Q13105 803 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 FAM83AQ86UY5 434 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 RMDN2Q96LZ7 410 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 F8VZ95 297 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 MAP4P27816 1152 aaKnown RBP17.06■□□□□ 0.32
SHTN1-202ENST00000355371 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 WDR49Q8IV35 697 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 MANSC1Q9H8J5 431 aa17.06■□□□□ 0.32
SHTN1-202ENST00000355371 DDTLA6NHG4 134 aaPredicted RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 LRRIQ3A6PVS8 624 aaPredicted RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 HMBSP08397 361 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 CYP24A1Q07973 514 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 SREBF2Q12772 1141 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 GNASQ5JWF2 1037 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 NT5DC1Q5TFE4 455 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 LONP2Q86WA8 852 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 ADAM33Q9BZ11 813 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 MUC3BQ9H195 1237 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 TMEM131LA2VDJ0 1609 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 VWDEQ8N2E2 1590 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 ST8SIA6P61647 398 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 HERVK_113P62684 666 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 PTGISQ16647 500 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 KDM7AQ6ZMT4 941 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 SETD3Q86TU7 594 aaPredicted RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 CDYLQ9Y232 598 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 PPLO60437 1756 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 RPLP2P05387 115 aaKnown RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 MCL1Q07820 350 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 DNERQ8NFT8 737 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 LZICQ8WZA0 190 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 E2F7Q96AV8 911 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 MTMR12Q9C0I1 747 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 VCAM1P19320 739 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 GCLCP48506 637 aaPredicted RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 GTF2H3Q13889 308 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 EFL1Q7Z2Z2 1120 aaKnown RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 ERP27Q96DN0 273 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 SLITRK1Q96PX8 696 aa17.05■□□□□ 0.32
SHTN1-202ENST00000355371 TSR3Q9UJK0 312 aaKnown RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 SCAF8Q9UPN6 1271 aaKnown RBP17.05■□□□□ 0.32
SHTN1-202ENST00000355371 APOA4P06727 396 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 ATICP31939 592 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 TGFB2P61812 414 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 MGAT5BQ3V5L5 792 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 TFDP3Q5H9I0 405 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 IPMKQ8NFU5 416 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 FOPNLQ96NB1 174 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 OSBPL1AQ9BXW6 950 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 MTIF3Q9H2K0 278 aaKnown RBP17.04■□□□□ 0.32
SHTN1-202ENST00000355371 CHCHD3Q9NX63 227 aaKnown RBP17.04■□□□□ 0.32
SHTN1-202ENST00000355371 CAPN6Q9Y6Q1 641 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 MST1RQ04912 1400 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 HARS2P49590 506 aaKnown RBP17.04■□□□□ 0.32
SHTN1-202ENST00000355371 SYTL3Q4VX76 610 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 YAF2Q8IY57 180 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 PCYOX1LQ8NBM8 494 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 SYTL5Q8TDW5 730 aaPredicted RBP17.04■□□□□ 0.32
SHTN1-202ENST00000355371 SCHIP1Q9P0W5 487 aaPredicted RBP17.04■□□□□ 0.32
SHTN1-202ENST00000355371 TEKT2Q9UIF3 430 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 ARHGAP26Q9UNA1 814 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 AKAP3O75969 853 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 SHMT1P34896 483 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 RGS2P41220 211 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 OR1G1P47890 313 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 NAF1Q96HR8 494 aaKnown RBP17.04■□□□□ 0.32
SHTN1-202ENST00000355371 PDCD2LQ9BRP1 358 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 CYP3A43Q9HB55 503 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 CHORDC1Q9UHD1 332 aaPredicted RBP17.04■□□□□ 0.32
SHTN1-202ENST00000355371 GGT7Q9UJ14 662 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 SUPT3HO75486 399 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 RGS4P49798 205 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 TBC1D19Q8N5T2 526 aa17.04■□□□□ 0.32
SHTN1-202ENST00000355371 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.04■□□□□ 0.32
SHTN1-202ENST00000355371 CCT8L1PA6NM43 557 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 PRRG1O14668 218 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 GPR182O15218 404 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 F9P00740 461 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 SARSP49591 514 aaKnown RBP17.03■□□□□ 0.32
SHTN1-202ENST00000355371 NIPA1Q7RTP0 329 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 ATP6V0D2Q8N8Y2 350 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 OR9Q1Q8NGQ5 310 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 PNKPQ96T60 521 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 IL17RBQ9NRM6 502 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms