RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TGDSO95455 350 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 ALDH18A1P54886 795 aaKnown RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 ARHGAP8P85298 464 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 APOFQ13790 326 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 PRKD1Q15139 912 aaPredicted RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 CCDC153Q494R4 210 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 RALGPS1Q5JS13 557 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 METTL21CQ5VZV1 264 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 ITPRIPL1Q6GPH6 555 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 RAB3IL1Q8TBN0 382 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 ATP6V0A1Q93050 837 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 DCUN1D1Q96GG9 259 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 BRIP1Q9BX63 1249 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 ZNF696Q9H7X3 374 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 C17orf75Q9HAS0 396 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 KIAA1024Q9UPX6 916 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 RBMX2Q9Y388 322 aaKnown RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 CRTAMO95727 393 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 PLA2G4BP0C869 781 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 PCP11498 1178 aaKnown RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 STIP1P31948 543 aaKnown RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 CIITAP33076 1130 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 ALDH1A3P47895 512 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 GRM4Q14833 912 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 PSMD6Q15008 389 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 CNGA3Q16281 694 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 DCDC5Q6ZRR9 648 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 AHI1Q8N157 1196 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 EFCAB3Q8N7B9 438 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 GRK7Q8WTQ7 553 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 PSPC1Q8WXF1 523 aaKnown RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 GPATCH1Q9BRR8 931 aaKnown RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 PAIP1Q9H074 479 aaKnown RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 PSMC3IPQ9P2W1 217 aaPredicted RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 NR3C1P04150 777 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 POLR2MP0CAP2 368 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 LPCAT2Q7L5N7 544 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 FASTKD5Q7L8L6 764 aaKnown RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 ANKS1BQ7Z6G8 1248 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 SEPT12Q8IYM1 358 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 ZMAT2Q96NC0 199 aaKnown RBP13.88□□□□□ -0.19
IFT88-202ENST00000351808 HEMGNQ9BXL5 484 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 TBC1D23Q9NUY8 699 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 SLC38A7Q9NVC3 462 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 AP4B1Q9Y6B7 739 aa13.88□□□□□ -0.19
IFT88-202ENST00000351808 GNA11P29992 359 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 NEK2P51955 445 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 CAMK2BQ13554 666 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 DEPDC1Q5TB30 811 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 ZCCHC9Q8N567 271 aaKnown RBP13.87□□□□□ -0.19
IFT88-202ENST00000351808 GBA3Q9H227 469 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 Q9H521 79 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 KIF1AQ12756 1690 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 DCCP43146 1447 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 K7EPI3 171 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 EDIL3O43854 480 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 CPOXP36551 454 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 KPNA1P52294 538 aaPredicted RBP13.87□□□□□ -0.19
IFT88-202ENST00000351808 SLC5A3P53794 718 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 TFAP4Q01664 338 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
IFT88-202ENST00000351808 UBAP2LQ14157 1087 aaKnown RBP13.87□□□□□ -0.19
IFT88-202ENST00000351808 PDK1Q15118 436 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 DHRS4L2Q6PKH6 230 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 LZTR1Q8N653 840 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 ALLCQ8N6M5 410 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 ZNF564Q8TBZ8 553 aaPredicted RBP13.87□□□□□ -0.19
IFT88-202ENST00000351808 NUP85Q9BW27 656 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 NDEL1Q9GZM8 345 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 SOX13Q9UN79 622 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 GIT1Q9Y2X7 761 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 NR2E3Q9Y5X4 410 aa13.87□□□□□ -0.19
IFT88-202ENST00000351808 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 PEX1O43933 1283 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 S100A1P23297 94 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 CDK9P50750 372 aaKnown RBP13.86□□□□□ -0.19
IFT88-202ENST00000351808 ATP1A4Q13733 1029 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 INAQ16352 499 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 OGFOD2Q6N063 350 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 NOP9Q86U38 636 aaKnown RBP13.86□□□□□ -0.19
IFT88-202ENST00000351808 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
IFT88-202ENST00000351808 CCDC89Q8N998 374 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 BIRC8Q96P09 236 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 MXD3Q9BW11 206 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 GTPBP10A4D1E9 387 aaKnown RBP13.86□□□□□ -0.19
IFT88-202ENST00000351808 UBAP1LF5GYI3 381 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 CASQ2O14958 399 aaPredicted RBP13.86□□□□□ -0.19
IFT88-202ENST00000351808 CALUO43852 315 aaPredicted RBP13.86□□□□□ -0.19
IFT88-202ENST00000351808 BANF1O75531 89 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 FAM58BPP0C7Q3 252 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms