RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ELAC1Q9H777 363 aaKnown RBP19.77■□□□□ 0.76
PTN-201ENST00000348225 SYNCQ9H7C4 482 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 TMEM161AQ9NX61 479 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 WDR35Q9P2L0 1181 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 HESX1Q9UBX0 185 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 SPOPO43791 374 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 SETSIPP0DME0 302 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 FGFR1P11362 822 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 COMTP21964 271 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 SLC1A1P43005 524 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 GPD2P43304 727 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 PTPN20Q4JDL3 420 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 ZNF572Q7Z3I7 529 aaPredicted RBP19.76■□□□□ 0.75
PTN-201ENST00000348225 PHLDB2Q86SQ0 1253 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 C12orf29Q8N999 325 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 DBF4BQ8NFT6 615 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 FEZF2Q8TBJ5 459 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 IPO4Q8TEX9 1081 aaKnown RBP19.76■□□□□ 0.75
PTN-201ENST00000348225 BTBD6Q96KE9 485 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 WNT8AQ9H1J5 351 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 NME7Q9Y5B8 376 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 GSCP56915 257 aaPredicted RBP19.76■□□□□ 0.75
PTN-201ENST00000348225 ITIH3Q06033 890 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 PDCLQ13371 301 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 ERCC6LQ2NKX8 1250 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 TRIM60Q495X7 471 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 PPP1R26Q5T8A7 1209 aaPredicted RBP19.76■□□□□ 0.75
PTN-201ENST00000348225 C3orf20Q8ND61 904 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 RABGGTAQ92696 567 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 C18orf8Q96DM3 657 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 DPEP3Q9H4B8 488 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 KANSL3Q9P2N6 904 aa19.76■□□□□ 0.75
PTN-201ENST00000348225 ARHGEF37A1IGU5 675 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 DDX3YO15523 660 aaKnown RBP19.75■□□□□ 0.75
PTN-201ENST00000348225 PDGFRBP09619 1106 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 GJA8P48165 433 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 LHX1P48742 406 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 AARSP49588 968 aaKnown RBP eCLIP19.75■□□□□ 0.75
PTN-201ENST00000348225 TLE2Q04725 743 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 FAAP100Q0VG06 881 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 GPNMBQ14956 572 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 ELF2Q15723 593 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 NOMO2Q5JPE7 1267 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 LLGL2Q6P1M3 1020 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.75■□□□□ 0.75
PTN-201ENST00000348225 UBA3Q8TBC4 463 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 SPATA18Q8TC71 538 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 TSC1Q92574 1164 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 CARD9Q9H257 536 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 FAM49BQ9NUQ9 324 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 CACNG4Q9UBN1 327 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 CYTH4Q9UIA0 394 aa19.75■□□□□ 0.75
PTN-201ENST00000348225 CCDC66A2RUB6 948 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 PDE2AO00408 941 aaPredicted RBP19.74■□□□□ 0.75
PTN-201ENST00000348225 GABRDO14764 452 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 CAPN15O75808 1086 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 B3GAT3O94766 335 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 PROSCO94903 275 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 ODC1P11926 461 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 LMO2P25791 158 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 CTNNA2P26232 953 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 GABRB2P47870 512 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 SNX16P57768 344 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 PSMC1P62191 440 aaKnown RBP19.74■□□□□ 0.75
PTN-201ENST00000348225 NAA30Q147X3 362 aaPredicted RBP19.74■□□□□ 0.75
PTN-201ENST00000348225 CLLU1OSQ5K130 101 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 CYP4A22Q5TCH4 519 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 WSCD1Q658N2 575 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 DCUN1D2Q6PH85 259 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 OSTM1Q86WC4 334 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 C3orf58Q8NDZ4 430 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 CPXM1Q96SM3 734 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
PTN-201ENST00000348225 IP6K2Q9UHH9 426 aa19.74■□□□□ 0.75
PTN-201ENST00000348225 TCRBV5S1A1TA0A578 114 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 ENPP3O14638 875 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 CEP104O60308 925 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 CXCL10P02778 98 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 MAN1A1P33908 653 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 ZNF268Q14587 947 aaPredicted RBP19.73■□□□□ 0.75
PTN-201ENST00000348225 CLUL1Q15846 466 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 DCLRE1AQ6PJP8 1040 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 ABI1Q8IZP0 508 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 B3GALNT2Q8NCR0 500 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 ACTRT1Q8TDG2 376 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 PAAF1Q9BRP4 392 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 PCDHB7Q9Y5E2 793 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 TMEM191CA6NGB0 347 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 CTNNA1P35221 906 aaKnown RBP19.73■□□□□ 0.75
PTN-201ENST00000348225 BCAT1P54687 386 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 PKDCCQ504Y2 493 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 PPP1R15BQ5SWA1 713 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 METTL23Q86XA0 190 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 GPR161Q8N6U8 529 aaKnown RBP19.73■□□□□ 0.75
PTN-201ENST00000348225 CD101Q93033 1021 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 MS4A14Q96JA4 679 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 MCEEQ96PE7 176 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 PPP1R12CQ9BZL4 782 aa19.73■□□□□ 0.75
PTN-201ENST00000348225 DDX43Q9NXZ2 648 aaKnown RBP19.73■□□□□ 0.75
PTN-201ENST00000348225 DSEQ9UL01 958 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms