RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 SERPINB12Q96P63 405 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 ASCC2Q9H1I8 757 aaPredicted RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 KIAA1586Q9HCI6 787 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 FBXO6Q9NRD1 293 aaPredicted RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 SMYD2Q9NRG4 433 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 FSCN2O14926 492 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 LPXNO60711 386 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 FDX1P10109 184 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 ADORA2BP29275 332 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 NOMO3P69849 1222 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 TAF1BQ53T94 588 aaPredicted RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 TMEM63BQ5T3F8 832 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 SPOCD1Q6ZMY3 1216 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 KDELC2Q7Z4H8 507 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 SLC25A41Q8N5S1 370 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 TRIM11Q96F44 468 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 RBM41Q96IZ5 413 aaKnown RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 PRPSAP2O60256 369 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 CPP00450 1065 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 POLE2P56282 527 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
LMX1A-202ENST00000342310 BIRC2Q13490 618 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 ZACNQ401N2 412 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 EEF1DP3Q658K8 133 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 TCP10LQ8TDR4 215 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 TTC1Q99614 292 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 MECRQ9BV79 373 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 UNKQ9C0B0 810 aaKnown RBP13.17□□□□□ -0.3
LMX1A-202ENST00000342310 AS3MTQ9HBK9 375 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 HES2Q9Y543 173 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 MAPK13O15264 365 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 ZBED1O96006 694 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 POLR2BP30876 1174 aaKnown RBP13.17□□□□□ -0.3
LMX1A-202ENST00000342310 MMP14P50281 582 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 ARL4CP56559 192 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 NCALDP61601 193 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 C6orf89Q6UWU4 347 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 CES3Q6UWW8 571 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 OR6B3Q8NGW1 331 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 P3H4Q92791 437 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 LRRC19Q9H756 370 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 YY1AP1Q9H869 796 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 NOP53Q9NZM5 478 aaKnown RBP13.17□□□□□ -0.3
LMX1A-202ENST00000342310 WHRNQ9P202 907 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 SLC17A7Q9P2U7 560 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 FIS1Q9Y3D6 152 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 SNX9Q9Y5X1 595 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 KLRG2A4D1S0 409 aaPredicted RBP13.17□□□□□ -0.3
LMX1A-202ENST00000342310 ENO1P06733 434 aaKnown RBP13.17□□□□□ -0.3
LMX1A-202ENST00000342310 SUPT20HL2P0C7V6 817 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 STAT4Q14765 748 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 UNC45BQ8IWX7 931 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 PAFAH2Q99487 392 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 ZCWPW1Q9H0M4 648 aa13.17□□□□□ -0.3
LMX1A-202ENST00000342310 DHX35Q9H5Z1 703 aaKnown RBP13.17□□□□□ -0.3
LMX1A-202ENST00000342310 TCRBV7S3A2A0A539 114 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 EME2A4GXA9 379 aaPredicted RBP13.16□□□□□ -0.3
LMX1A-202ENST00000342310 TXNDC9O14530 226 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 SMIM24O75264 130 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 VNN1O95497 513 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 BGNP21810 368 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 PHBP35232 272 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 EPHB1P54762 984 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 NCKAP1LP55160 1127 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 WDR4P57081 412 aaKnown RBP13.16□□□□□ -0.3
LMX1A-202ENST00000342310 OGDHQ02218 1023 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 ECHDC2Q86YB7 292 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 ARMC2Q8NEN0 867 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 FAM81BQ96LP2 452 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 ZNF395Q9H8N7 513 aaPredicted RBP13.16□□□□□ -0.3
LMX1A-202ENST00000342310 PCMTD2Q9NV79 361 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 TXNDC16Q9P2K2 825 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 HEY2Q9UBP5 337 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 PACSIN3Q9UKS6 424 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 CSADQ9Y600 493 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
LMX1A-202ENST00000342310 GYG2O15488 501 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 RASSF9O75901 435 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 PYGBP11216 843 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 LCP1P13796 627 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 SLC1A1P43005 524 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 ALDH18A1P54886 795 aaKnown RBP13.16□□□□□ -0.3
LMX1A-202ENST00000342310 CAPSQ13938 189 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms