RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 TMEM169Q96HH4 297 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 GRID1Q9ULK0 1009 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 ZCCHC11Q5TAX3 1644 aaKnown RBP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 TMEM253P0C7T8 217 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 COMTP21964 271 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 CYP4A22Q5TCH4 519 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 MKNK1Q9BUB5 465 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 VPS33BQ9H267 617 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 KCNH7Q9NS40 1196 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 CST8O60676 142 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 CAMTA2O94983 1202 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 MDH1P40925 334 aaKnown RBP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 PMS1P54277 932 aaKnown RBP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 ACTN3Q08043 901 aaPredicted RBP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 ERAP2Q6P179 960 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 ZNF512BQ96KM6 892 aaPredicted RBP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 JMJD4Q9H9V9 463 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 DDX28Q9NUL7 540 aaKnown RBP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 SPACA6W5XKT8 324 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 C3orf62Q6ZUJ4 267 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 DEFB129Q9H1M3 183 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 MAN1C1Q9NR34 630 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 MPP6Q9NZW5 540 aa15.86■□□□□ 0.13
COL11A2-201ENST00000341947 TRMT6Q9UJA5 497 aaKnown RBP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 DBR1Q9UK59 544 aaKnown RBP15.86■□□□□ 0.13
COL11A2-201ENST00000341947 C2orf81A6NN90 581 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 GEMP55040 296 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 MFSD4BQ5TF39 518 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 SMIM5Q71RC9 77 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 ATG4CQ96DT6 458 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
COL11A2-201ENST00000341947 ENTPD7Q9NQZ7 604 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 F5H5T6 163 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 MAGEA4P43358 317 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 NCKAP1LP55160 1127 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 LINC00116Q8NCU8 138 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 EME1Q96AY2 570 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 WDCPQ9H6R7 721 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 COPG1Q9Y678 874 aaKnown RBP15.85■□□□□ 0.13
COL11A2-201ENST00000341947 RASSF10A6NK89 507 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 AIM2O14862 343 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 SLC9A1P19634 815 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 PPIL6Q8IXY8 311 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 EPC1Q9H2F5 836 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 MUTP22033 750 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 FDFT1P37268 417 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 ZNF669Q96BR6 464 aaPredicted RBP15.85■□□□□ 0.13
COL11A2-201ENST00000341947 MTO1Q9Y2Z2 717 aaKnown RBP15.85■□□□□ 0.13
COL11A2-201ENST00000341947 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.85■□□□□ 0.13
COL11A2-201ENST00000341947 CDY2AQ9Y6F7 541 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 CDY1Q9Y6F8 540 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 DIS3LQ8TF46 1054 aaKnown RBP15.85■□□□□ 0.13
COL11A2-201ENST00000341947 WNK4Q96J92 1243 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 TAAR1Q96RJ0 339 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 FAM118BQ9BPY3 351 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 PI4K2AQ9BTU6 479 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 SLC39A10Q9ULF5 831 aa15.85■□□□□ 0.13
COL11A2-201ENST00000341947 ATMINO43313 823 aaPredicted RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 ADCY3O60266 1144 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 ASS1P00966 412 aaKnown RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 RPA1P27694 616 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 PTPN7P35236 360 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 CSE1LP55060 971 aaKnown RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 JAMLQ86YT9 394 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 DPF2Q92785 391 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 CHP1Q99653 195 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 TSEN34Q9BSV6 310 aaKnown RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 NMRK1Q9NWW6 199 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 HOXA2O43364 376 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 CYTH3O43739 400 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 MBL2P11226 248 aaPredicted RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 EPHB2P29323 1055 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 RUNX1T1Q06455 604 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 FMR1Q06787 632 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 SETD3Q86TU7 594 aaPredicted RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 AGGF1Q8N302 714 aaeCLIP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 CAPN10Q9HC96 672 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 GGT7Q9UJ14 662 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 TTLL13PA6NNM8 815 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 KRT78Q8N1N4 520 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 FAM71DQ8N9W8 422 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 EPN3Q9H201 632 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 SPATA31A6Q5VVP1 1343 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 A0A1W2PQJ5 194 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 SOX11P35716 441 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 FXR2P51116 673 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 CNTN1Q12860 1018 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 WDR24Q96S15 920 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 CCDC134Q9H6E4 229 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 SCN3BQ9NY72 215 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 TRPC5OSA6NMA1 111 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 M0QYT0 321 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 ANXA11P50995 505 aaKnown RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 ITGA8P53708 1063 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 FAM83EQ2M2I3 478 aa15.84■□□□□ 0.13
COL11A2-201ENST00000341947 RIBC1Q8N443 379 aaPredicted RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 RPRD1AQ96P16 312 aaPredicted RBP15.84■□□□□ 0.13
COL11A2-201ENST00000341947 KRCC1Q9NPI7 259 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms