RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 IQCF3P0C7M6 154 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 ELNP15502 786 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 ITIH2P19823 946 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 PROZP22891 400 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 MYL6P60660 151 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 CDC42EP1Q00587 391 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 TMEM62Q0P6H9 643 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 QPCTQ16769 361 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 TRMT10CQ7L0Y3 403 aaKnown RBP15.88■□□□□ 0.13
TPM3-208ENST00000341485 CDR2LQ86X02 465 aaPredicted RBP15.88■□□□□ 0.13
TPM3-208ENST00000341485 THNSL1Q8IYQ7 743 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 C3orf20Q8ND61 904 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.88■□□□□ 0.13
TPM3-208ENST00000341485 FEZF2Q8TBJ5 459 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 PPM1EQ8WY54 764 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 FAM212AQ96EL1 285 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 SNF8Q96H20 258 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 DDX23Q9BUQ8 820 aaKnown RBP15.88■□□□□ 0.13
TPM3-208ENST00000341485 IMPG2Q9BZV3 1241 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 CDC42EP4Q9H3Q1 356 aaKnown RBP15.88■□□□□ 0.13
TPM3-208ENST00000341485 USTQ9Y2C2 406 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 AGTP01019 485 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 GNAT1P11488 350 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 PRKAR2AP13861 404 aaKnown RBP15.88■□□□□ 0.13
TPM3-208ENST00000341485 CD58P19256 250 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 GJC1P36383 396 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 MMP13P45452 471 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 LIG3P49916 1009 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 AP3M2P53677 418 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 KIZQ2M2Z5 673 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 EEF1DP3Q658K8 133 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 PPP1R2P3Q6NXS1 205 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 ATL2Q8NHH9 583 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 GRK7Q8WTQ7 553 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 MTG1Q9BT17 334 aaPredicted RBP15.88■□□□□ 0.13
TPM3-208ENST00000341485 PTPRHQ9HD43 1115 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 NEU2Q9Y3R4 380 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 MBLAC1A4D2B0 266 aaPredicted RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 MEFVO15553 781 aaPredicted RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 CPP00450 1065 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 MMP8P22894 467 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 BRD2P25440 801 aaKnown RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 SLCO1A2P46721 670 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 ITGA8P53708 1063 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 AUHQ13825 339 aaKnown RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 SURF1Q15526 300 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 TNFAIP8L3Q5GJ75 292 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 ERMARDQ5T6L9 678 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 MICALCLQ6ZW33 695 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 CROCCP2Q86T23 111 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 EXD1Q8NHP7 514 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 RAET1EQ8TD07 263 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 CENPTQ96BT3 561 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 CPB2Q96IY4 423 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 CCDC114Q96M63 670 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 XPO6Q96QU8 1125 aaKnown RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 FAM118BQ9BPY3 351 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 SELENOSQ9BQE4 189 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 GCOM2Q9BZD3 368 aaPredicted RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 OSBPL8Q9BZF1 889 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 UPF3AQ9H1J1 476 aaKnown RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 CDT1Q9H211 546 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 PARVAQ9NVD7 372 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 GGA2Q9UJY4 613 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 C5orf60A6NFR6 353 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 RASGRF2O14827 1237 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 TREHO43280 583 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 GAS8O95995 478 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 CHN1P15882 459 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 CCND3P30281 292 aaPredicted RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 SSR1P43307 286 aaKnown RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 OSTNP61366 133 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 RPL7AP62424 266 aaKnown RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 CCNG2Q16589 344 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 AMHR2Q16671 573 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 C6orf89Q6UWU4 347 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 DNAJB3Q8WWF6 145 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 NIF3L1Q9GZT8 377 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 XPNPEP3Q9NQH7 507 aa15.87■□□□□ 0.13
TPM3-208ENST00000341485 DDX20Q9UHI6 824 aaKnown RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 CPSF3Q9UKF6 684 aaKnown RBP15.87■□□□□ 0.13
TPM3-208ENST00000341485 TCRBV5S1A1TA0A578 114 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 GPR25O00155 361 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 KIAA0754O94854 1291 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 ATF2P15336 505 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 TCF4P15884 667 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 CDR1P51861 262 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 HTRA3P83110 453 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 ZNF200P98182 395 aaPredicted RBP15.86■□□□□ 0.13
TPM3-208ENST00000341485 SLC20A2Q08357 652 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 ZNF252P-AS1Q0IIN9 211 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 HIC1Q14526 733 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 ATP13A4Q4VNC1 1196 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 MICALL1Q8N3F8 863 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 HOMER3Q9NSC5 361 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 CISHQ9NSE2 258 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 KLHL11Q9NVR0 708 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 IP6K2Q9UHH9 426 aa15.86■□□□□ 0.13
TPM3-208ENST00000341485 TMEM191CA6NGB0 347 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms