RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SIK3Q9Y2K2 1263 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 MYBPHLA2RUH7 354 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 TEX33O43247 280 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 CBFA2T2O43439 604 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 OR4Q2P0C623 313 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 UCHL3P15374 230 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 EPCAMP16422 314 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 HOXB8P17481 243 aaPredicted RBP16.38■□□□□ 0.21
SEC13-201ENST00000337354 ACO1P21399 889 aaKnown RBP16.38■□□□□ 0.21
SEC13-201ENST00000337354 GTF2F1P35269 517 aaKnown RBP eCLIP16.38■□□□□ 0.21
SEC13-201ENST00000337354 TUFMP49411 452 aaKnown RBP16.38■□□□□ 0.21
SEC13-201ENST00000337354 ADCY1Q08828 1119 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 CFAP221Q4G0U5 840 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 EP400NLQ6ZTU2 488 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 UBR7Q8N806 425 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 KREMEN1Q96MU8 473 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
SEC13-201ENST00000337354 CYP4F11Q9HBI6 524 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 CRTAC1Q9NQ79 661 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 CNTN6Q9UQ52 1028 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 PCDHB5Q9Y5E4 795 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 MTMR11A4FU01 709 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 HCRTO43612 131 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 ATP2C2O75185 946 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 PAEPP09466 180 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 LIN9Q5TKA1 542 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 LLGL2Q6P1M3 1020 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 ACOT1Q86TX2 421 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 SPATA2LQ8IUW3 424 aaPredicted RBP16.37■□□□□ 0.21
SEC13-201ENST00000337354 VN1R2Q8NFZ6 395 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 KAT5Q92993 513 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 STK33Q9BYT3 514 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 MAN1C1Q9NR34 630 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 FAM207AQ9NSI2 230 aaPredicted RBP16.37■□□□□ 0.21
SEC13-201ENST00000337354 ZDHHC7Q9NXF8 308 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 CLDND1Q9NY35 253 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 IFNKQ9P0W0 207 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 COG5Q9UP83 839 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 PCDHB4Q9Y5E5 795 aa16.37■□□□□ 0.21
SEC13-201ENST00000337354 REV3LO60673 3130 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
SEC13-201ENST00000337354 PRRG1O14668 218 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 ZMYND10O75800 440 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 GLP2RO95838 553 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 HNRNPA1P09651 372 aaKnown RBP eCLIP16.36■□□□□ 0.21
SEC13-201ENST00000337354 SPATA31D3P0C874 917 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 HOXA9P31269 272 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 RAD23BP54727 409 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 PSMC1P62191 440 aaKnown RBP16.36■□□□□ 0.21
SEC13-201ENST00000337354 APBA1Q02410 837 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 DUSP4Q13115 394 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 ZNF394Q53GI3 561 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 GJB7Q6PEY0 223 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 SARM1Q6SZW1 724 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 TMEM270Q6UE05 265 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 VSTM1Q6UX27 236 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 CYP26C1Q6V0L0 522 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 SPATA31D4Q6ZUB0 917 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 ATAD1Q8NBU5 361 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 SHC3Q92529 594 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 PCED1BQ96HM7 432 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 HEXIM2Q96MH2 286 aaKnown RBP16.36■□□□□ 0.21
SEC13-201ENST00000337354 PGLYRP2Q96PD5 576 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 TWNKQ96RR1 684 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 NUP58Q9BVL2 599 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 NAA15Q9BXJ9 866 aaKnown RBP16.36■□□□□ 0.21
SEC13-201ENST00000337354 ELOVL4Q9GZR5 314 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 DPEP3Q9H4B8 488 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 TMLHEQ9NVH6 421 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 PRUNE2Q8WUY3 3088 aa16.36■□□□□ 0.21
SEC13-201ENST00000337354 SCN1AP35498 2009 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 BRWD1Q9NSI6 2320 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 LINC01565O15544 149 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 NOL4O94818 638 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 PAPLNO95428 1278 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 C8AP07357 584 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 CYP27A1Q02318 531 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 PLD1Q13393 1074 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 MDH1BQ5I0G3 518 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 IQCEQ6IPM2 695 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 ANKRD54Q6NXT1 300 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 SLC4A11Q8NBS3 891 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 CMASQ8NFW8 434 aaPredicted RBP16.35■□□□□ 0.21
SEC13-201ENST00000337354 HLA-CQ95604 372 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 MYLPFQ96A32 169 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 IQCDQ96DY2 449 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 CYFIP2Q96F07 1278 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 CEP295NLQ96MC4 621 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 RHOBTB2Q9BYZ6 727 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 GANQ9H2C0 597 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 SFXN1Q9H9B4 322 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 ABI2Q9NYB9 513 aaPredicted RBP16.35■□□□□ 0.21
SEC13-201ENST00000337354 CLEC1BQ9P126 229 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 CEP72Q9P209 647 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 HMGXB4Q9UGU5 601 aa16.35■□□□□ 0.21
SEC13-201ENST00000337354 SPDYE4A6NLX3 237 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 SEC24AO95486 1093 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms