RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 FHOD1Q9Y613 1164 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 TULP1O00294 542 aaPredicted RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 SOX5P35711 763 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 EIF4A3P38919 411 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 KIF11P52732 1056 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 BMS1Q14692 1282 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 ZACNQ401N2 412 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 TDRD12Q587J7 1177 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 IQCEQ6IPM2 695 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 LILRA6Q6PI73 481 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 IRF2BP2Q7Z5L9 587 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 WDR49Q8IV35 697 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 PLEKHO2Q8TD55 490 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 PIK3R5Q8WYR1 880 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 CCDC127Q96BQ5 260 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 FAXDC2Q96IV6 333 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 NT5C1BQ96P26 610 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 UHRF1Q96T88 793 aaPredicted RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 EMILIN2Q9BXX0 1053 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 PDE11AQ9HCR9 933 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 UBQLN1Q9UMX0 589 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 PTPRJQ12913 1337 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 SCN1AP35498 2009 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 TGM5O43548 720 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 TNNI1P19237 187 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 VAV2P52735 878 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 GCNT1Q02742 428 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 KIF5AQ12840 1032 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 SMAD4Q13485 552 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 TMEM132DQ14C87 1099 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 SMAD2Q15796 467 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 SLC18A3Q16572 532 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 WDR44Q5JSH3 913 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 LMBRD2Q68DH5 695 aaPredicted RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 SV2AQ7L0J3 742 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 KIAA1328Q86T90 577 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 CD302Q8IX05 232 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 SUSD6Q92537 303 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 KHSRPQ92945 711 aaKnown RBP eCLIP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 DESI2Q9BSY9 194 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 FNIP2Q9P278 1114 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 STK39Q9UEW8 545 aa17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
PDLIM1-201ENST00000329399 ANO9A1A5B4 782 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 F8VZ95 297 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 DLATP10515 647 aaKnown RBP17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 CYP3A5P20815 502 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 DRAP1Q14919 205 aaPredicted RBP17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 PSMD5Q16401 504 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 RARS2Q5T160 578 aaKnown RBP17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 C9orf57Q5W0N0 161 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 NT5DC4Q86YG4 428 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 CXorf38Q8TB03 319 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 CASP10Q92851 521 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 SUSD3Q96L08 255 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 TSPAN18Q96SJ8 248 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 ASB7Q9H672 318 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 INTUQ9ULD6 942 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 DOCK6Q96HP0 2047 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 PLXNA3P51805 1871 aa17.55■□□□□ 0.4
PDLIM1-201ENST00000329399 PIRO00625 290 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 PJA2O43164 708 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 TBC1D4O60343 1298 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 RFPL2O75678 378 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 C4BPAP04003 597 aaKnown RBP17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 MRPL58Q14197 206 aaKnown RBP17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 DUOXA2Q1HG44 320 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 PHLDB3Q6NSJ2 640 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 TMC5Q6UXY8 1006 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 CALR3Q96L12 384 aaKnown RBP17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 POP1Q99575 1024 aaKnown RBP17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 UBE2TQ9NPD8 197 aaPredicted RBP17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 DPP3Q9NY33 737 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 PCDHA13Q9Y5I0 950 aa17.54■□□□□ 0.4
PDLIM1-201ENST00000329399 ADH1AP07327 375 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 TBXAS1P24557 533 aaPredicted RBP17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 OR1D2P34982 312 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 MAGEA1P43355 309 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 AARSP49588 968 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 LILRA4P59901 499 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 ELAVL2Q12926 359 aaKnown RBP17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 VARS2Q5ST30 1063 aaKnown RBP17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 GPR65Q8IYL9 337 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 RNF10Q8N5U6 811 aaKnown RBP17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 ACRBPQ8NEB7 543 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 OR5B17Q8NGF7 314 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 UBE2Q2Q8WVN8 375 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 IMPG2Q9BZV3 1241 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 MAN1C1Q9NR34 630 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 SSX2IPQ9Y2D8 614 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 DERAQ9Y315 318 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 C2CD2Q9Y426 696 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 NUB1Q9Y5A7 615 aa17.53■□□□□ 0.4
PDLIM1-201ENST00000329399 BTNL10A8MVZ5 291 aa17.52■□□□□ 0.4
PDLIM1-201ENST00000329399 CASQ1P31415 396 aa17.52■□□□□ 0.4
PDLIM1-201ENST00000329399 BPIFB4P59827 614 aa17.52■□□□□ 0.4
PDLIM1-201ENST00000329399 GNG11P61952 73 aa17.52■□□□□ 0.4
PDLIM1-201ENST00000329399 TFAMQ00059 246 aaKnown RBP17.52■□□□□ 0.4
PDLIM1-201ENST00000329399 ZP2Q05996 745 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms