RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RMND5BQ96G75 393 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 MADDQ8WXG6 1647 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PDXKO00764 312 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 EPN2O95208 641 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 FAM83BQ5T0W9 1011 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 GINM1Q9NU53 330 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 MAP10Q9P2G4 905 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 APOC1P02654 83 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PEX5P50542 639 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 VEPH1Q14D04 833 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PKN2Q16513 984 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 RCOR2Q8IZ40 523 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 LSM14AQ8ND56 463 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 BBS1Q8NFJ9 593 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 VAV3Q9UKW4 847 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 METP08581 1390 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 TNFAIP8O95379 198 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ARF4P18085 180 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 RRM2BQ7LG56 351 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 CMTR1Q8N1G2 835 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 KCTD4Q8WVF5 259 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 MED15Q96RN5 788 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PIGSQ96S52 555 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 TMCC2O75069 709 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 MTA1Q13330 715 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 SGMS1Q86VZ5 419 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PPP2R3CQ969Q6 453 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 FTCDO95954 541 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 RALAP11233 206 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 CXCR5P32302 372 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 VAMP7P51809 220 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ADCY1Q08828 1119 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 CCDC137Q6PK04 289 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 MRPL1Q9BYD6 325 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ROPN1BQ9BZX4 212 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 KLHL4Q9C0H6 718 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ROPN1Q9HAT0 212 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 COMMD9Q9P000 198 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PYCARDQ9ULZ3 195 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 NDUFB9Q9Y6M9 179 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ABCC3O15438 1527 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 MMP14P50281 582 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 GPC3P51654 580 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 BCAR1P56945 870 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PRAMEP78395 509 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 SYN2Q92777 582 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 SAMSN1Q9NSI8 373 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 CLTCL1P53675 1640 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 CNOT3O75175 753 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 GNA15P30679 374 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 RHAGQ02094 409 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 RABGAP1LQ5R372 815 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ANKRD13CQ8N6S4 541 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ANTXR1Q9H6X2 564 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 SP110Q9HB58 689 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 IL12AP29459 219 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 CDK8P49336 464 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 LRRC24Q50LG9 513 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF589Q86UQ0 364 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 CLP1Q92989 425 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 NGRNQ9NPE2 291 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 POFUT2Q9Y2G5 429 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 NPHP4O75161 1426 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF568Q3ZCX4 644 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 PIH1D3Q9NQM4 214 aaKnown RBP10.1□□□□□ -0.79
COL12A1-201ENST00000322507 KLHL3Q9UH77 587 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 APPL1Q9UKG1 709 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 COMMD3-BMI1R4GMX3 469 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 ERBB3P21860 1342 aa10.1□□□□□ -0.79
COL12A1-201ENST00000322507 SAGE2PA6NJ88 616 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 KRT36O76013 467 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 IST1P53990 364 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 PSMC5P62195 406 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 POLIQ9UNA4 740 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 DLC1Q96QB1 1528 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 KPNA3O00505 521 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 TBX3O15119 743 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MEI1Q5TIA1 1274 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 LPCAT2Q7L5N7 544 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 TMC2Q8TDI7 906 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 TUBA1CQ9BQE3 449 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 NMRK1Q9NWW6 199 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MAPRE3Q9UPY8 281 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 GUCA1CO95843 209 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MAGOHP61326 146 aaKnown RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MAPRE1Q15691 268 aaKnown RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 TMEM270Q6UE05 265 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 STK33Q9BYT3 514 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 VPS33BQ9H267 617 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 KRCC1Q9NPI7 259 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 SLC38A7Q9NVC3 462 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MYH3P11055 1940 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 ZSCAN9O15535 394 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 DLG4P78352 724 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 SNX17Q15036 470 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 EDRF1Q3B7T1 1238 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms