RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TRIM73Q86UV7 250 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ARHGEF1Q92888 912 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 CRAMP1Q96RY5 1269 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 C11orf70Q9BRQ4 267 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 HOMER2Q9NSB8 354 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 MRGBPQ9NV56 204 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF180Q9UJW8 692 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 RGPD8O14715 1765 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 IRS2Q9Y4H2 1338 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 CCNT2O60583 730 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 LSM8O95777 96 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 TBXAS1P24557 533 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ACAT1P24752 427 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 TFDP2Q14188 446 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 CC2D2BQ6DHV5 1058 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 DCUN1D2Q6PH85 259 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 RIPOR1Q6ZS17 1223 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ARID3BQ8IVW6 561 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ABRAQ8N0Z2 381 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 LENG1Q96BZ8 264 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 CMTM5Q96DZ9 223 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 IMPG2Q9BZV3 1241 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 NMUR2Q9GZQ4 415 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 KANSL3Q9P2N6 904 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 APOBEC2Q9Y235 224 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 IGLV3-22A0A075B6J6 115 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 GARTP22102 1010 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 GRK2P25098 689 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 HMGB2P26583 209 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 SHMT1P34896 483 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 RTP1P59025 263 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SULT2A1Q06520 285 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 CBLBQ13191 982 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 CCDC142Q17RM4 750 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 C4orf22Q6V702 233 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 TMEM35BQ8NCS4 154 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 RBM15BQ8NDT2 890 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 WDR60Q8WVS4 1066 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 NRG4Q8WWG1 115 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 TTC17Q96AE7 1141 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 FBXL18Q96ME1 805 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SERPINI1Q99574 410 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 TBC1D22BQ9NU19 505 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 BTBD7Q9P203 1132 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 STRIP2Q9ULQ0 834 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 GRIN3BO60391 1043 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 KRT5P13647 590 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF200P98182 395 aaPredicted RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 OVGP1Q12889 678 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 TRIP10Q15642 601 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 BRDTQ58F21 947 aaPredicted RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 RFWD3Q6PCD5 774 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SEPT14Q6ZU15 432 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 KCTD1Q719H9 257 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 CROCCP3Q8IVE0 287 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 MAP4K3Q8IVH8 894 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ICA1LQ8NDH6 482 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 FEZF2Q8TBJ5 459 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 CHURC1Q8WUH1 139 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 CCDC127Q96BQ5 260 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 LXNQ9BS40 222 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 S100A14Q9HCY8 104 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 LMCD1Q9NZU5 365 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 WASF2Q9Y6W5 498 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SLIT2O94813 1529 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 MYPNQ86TC9 1320 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 IRF6O14896 467 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 CLPTM1O96005 669 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ASLP04424 464 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 NOP14P78316 857 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 PTK7Q13308 1070 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 PICALMQ13492 652 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SPOCD1Q6ZMY3 1216 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 C3orf62Q6ZUJ4 267 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SV2AQ7L0J3 742 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SREK1Q8WXA9 508 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 RSAD2Q8WXG1 361 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 KAT5Q92993 513 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ATP2A3Q93084 1043 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 SRPK1Q96SB4 655 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 CNTN3Q9P232 1028 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 ITGA11Q9UKX5 1188 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 WTIPA6NIX2 430 aaPredicted RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 PYGLP06737 847 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 HARSP12081 509 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 ATF7P17544 494 aaPredicted RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 ACADVLP49748 655 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 COPAP53621 1224 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 AP3M2P53677 418 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 YWHAGP61981 247 aaKnown RBP eCLIP5□□□□□ -1.61
PTPN13-201ENST00000316707 TRPC3Q13507 836 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 PIGHQ14442 188 aaPredicted RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 OASLQ15646 514 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 METTL21CQ5VZV1 264 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 CHADLQ6NUI6 762 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 NIPA1Q7RTP0 329 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 NUDCD3Q8IVD9 361 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 RPGRQ92834 1020 aaKnown RBP5□□□□□ -1.61
PTPN13-201ENST00000316707 CBWD1Q9BRT8 395 aa5□□□□□ -1.61
PTPN13-201ENST00000316707 THTPAQ9BU02 230 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms