RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 DACT1Q9NYF0 836 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 XPR1Q9UBH6 696 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 HDAC9Q9UKV0 1011 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 KANK1Q14678 1352 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 CD109Q6YHK3 1445 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 ADGRL1O94910 1474 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 B5MCH6 92 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 RAB27BO00194 218 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 PJA2O43164 708 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 TXNP10599 105 aaKnown RBP4.75□□□□□ -1.65
SMCO3-201ENST00000316048 LINC00310P59036 64 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 RAB30Q15771 203 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 TIGD6Q17RP2 521 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 SLC44A4Q53GD3 710 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 ALFQ53S48 1182 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 ATXN7L2Q5T6C5 722 aaPredicted RBP4.75□□□□□ -1.65
SMCO3-201ENST00000316048 FBXO38Q6PIJ6 1188 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 CATSPERGQ6ZRH7 1159 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 KCTD20Q7Z5Y7 419 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 PDSS2Q86YH6 399 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 TFAP2CQ92754 450 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 TMEM120AQ9BXJ8 343 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 SERHLQ9NQF3 203 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 OAZ3Q9UMX2 235 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 CCDC144AA2RUR9 1427 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 TEX14Q8IWB6 1497 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 UNC13BO14795 1591 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 MBD3L4A6NDZ8 208 aaPredicted RBP4.74□□□□□ -1.65
SMCO3-201ENST00000316048 MBD3L3A6NE82 208 aaPredicted RBP4.74□□□□□ -1.65
SMCO3-201ENST00000316048 GOLGA6L3A6NEY3 463 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 TCAF2A6NFQ2 919 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 CLCA1A8K7I4 914 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 H7C4K7 107 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 IPO5O00410 1097 aaKnown RBP4.74□□□□□ -1.65
SMCO3-201ENST00000316048 PIP5K1BO14986 540 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 POMCP01189 267 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 AMHP03971 560 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 TOB1P50616 345 aaPredicted RBP4.74□□□□□ -1.65
SMCO3-201ENST00000316048 RAC3P60763 192 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 SLFN5Q08AF3 891 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 SPARCL1Q14515 664 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 BEND5Q7L4P6 421 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 ZNF280BQ86YH2 543 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 ELOA2Q8IYF1 753 aaPredicted RBP4.74□□□□□ -1.65
SMCO3-201ENST00000316048 VGLL2Q8N8G2 317 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 TTYH3Q9C0H2 523 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.74□□□□□ -1.65
SMCO3-201ENST00000316048 SPON1Q9HCB6 807 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 VPS45Q9NRW7 570 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 TMX2Q9Y320 296 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 PLEKHM1Q9Y4G2 1056 aa4.74□□□□□ -1.65
SMCO3-201ENST00000316048 DHX29Q7Z478 1369 aaKnown RBP4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CCDC78A2IDD5 438 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CCER2I3L3R5 266 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 A1BGP04217 495 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 FCER1AP12319 257 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 IL1R2P27930 398 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 POU6F2P78424 691 aaPredicted RBP4.73□□□□□ -1.65
SMCO3-201ENST00000316048 FAM111BQ6SJ93 734 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CRTC1Q6UUV9 634 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 MED25Q71SY5 747 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 PPP1R32Q7Z5V6 425 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 SYT12Q8IV01 421 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 Q8N3U1 123 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 LINC01356Q8N9X3 169 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 DNERQ8NFT8 737 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 NLGN4YQ8NFZ3 816 aaPredicted RBP4.73□□□□□ -1.65
SMCO3-201ENST00000316048 OR1N1Q8NGS0 311 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 SCAMP4Q969E2 229 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 RILPL2Q969X0 211 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 SPSB4Q96A44 273 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 GCC1Q96CN9 775 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 GNRHR2Q96P88 292 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 NEU1Q99519 415 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 PLA2G12BQ9BX93 195 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CDYLQ9Y232 598 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 IQGAP3Q86VI3 1631 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CFAP74Q9C0B2 1584 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 ATP7AQ04656 1500 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 ZNF518AQ6AHZ1 1483 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 UHRF1BP1Q6BDS2 1440 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 MYO1CO00159 1063 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 SYT5O00445 386 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 DCLK1O15075 740 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 ASNA1O43681 348 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 ALAS1P13196 640 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CR2P20023 1033 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 FDXRP22570 491 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 SERPINF1P36955 418 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CHN2P52757 468 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 SLURP1P55000 103 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CAP1Q01518 475 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 LMOD3Q0VAK6 560 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 PRKG1Q13976 671 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 KCNAB1Q14722 419 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 FKBP15Q5T1M5 1219 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CLASRPQ8N2M8 674 aaKnown RBP4.73□□□□□ -1.65
SMCO3-201ENST00000316048 MB21D1Q8N884 522 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 CYP2W1Q8TAV3 490 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 LRIG1Q96JA1 1093 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms