RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 R3HDM2Q9Y2K5 976 aaKnown RBP19.41■□□□□ 0.7
CCDC43-201ENST00000315286 SNX9Q9Y5X1 595 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 HMGCRP04035 888 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 GNAT1P11488 350 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 TM4SF4P48230 202 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 CRYBB1P53674 252 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-201ENST00000315286 UBXN11Q5T124 520 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 TMC3Q7Z5M5 1100 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 XYLT1Q86Y38 959 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 BEST2Q8NFU1 509 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 MRPL45Q9BRJ2 306 aaKnown RBP19.4■□□□□ 0.7
CCDC43-201ENST00000315286 NT5C1AQ9BXI3 368 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 RNF39Q9H2S5 420 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 SYNCQ9H7C4 482 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 KLK14Q9P0G3 267 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 LCMT1Q9UIC8 334 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 PLAAQ9Y263 795 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 PDCD11Q14690 1871 aaKnown RBP19.4■□□□□ 0.7
CCDC43-201ENST00000315286 GOLGA8KD6RF30 607 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 CA12O43570 354 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 ECEL1O95672 775 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 CYP3A5P20815 502 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 DHX9Q08211 1270 aaKnown RBP19.4■□□□□ 0.7
CCDC43-201ENST00000315286 GNASQ5JWF2 1037 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 TXNRD3NBQ6F5E7 133 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 ZNF771Q7L3S4 317 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-201ENST00000315286 NME8Q8N427 588 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 TTC39CQ8N584 583 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 NIPA2Q8N8Q9 360 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 C12orf29Q8N999 325 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 FBXO25Q8TCJ0 367 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 DCLK3Q9C098 648 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 FAM124BQ9H5Z6 455 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-201ENST00000315286 ABT1Q9ULW3 272 aaKnown RBP19.4■□□□□ 0.7
CCDC43-201ENST00000315286 GABRQQ9UN88 632 aa19.4■□□□□ 0.7
CCDC43-201ENST00000315286 PI4K2BG5E9Z4 385 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 PSMC4P43686 418 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 PDCLQ13371 301 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 TTMPQ5BVD1 217 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 LRRC38Q5VT99 294 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 RCOR2Q8IZ40 523 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 TRIB2Q92519 343 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 SLCO2A1Q92959 643 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 GOLGA6CA6NDK9 693 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 GOLGA6DP0CG33 693 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 NFX1Q12986 1120 aaKnown RBP19.39■□□□□ 0.69
CCDC43-201ENST00000315286 ZNF268Q14587 947 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-201ENST00000315286 ZFYVE27Q5T4F4 411 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 C9orf57Q5W0N0 161 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 TXLNGYQ9BZA5 131 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 GOLGA6AQ9NYA3 693 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 PSD3Q9NYI0 1048 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 WDR35Q9P2L0 1181 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 KIAA1257Q9ULG3 409 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 NME7Q9Y5B8 376 aa19.39■□□□□ 0.69
CCDC43-201ENST00000315286 SMIM28A0A1B0GU29 152 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 H0YGN5 161 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 CYBAP13498 195 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 PSMA2P25787 234 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 GABRB2P47870 512 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 GSCP56915 257 aaPredicted RBP19.38■□□□□ 0.69
CCDC43-201ENST00000315286 GJA9P57773 515 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 PPP1R7Q15435 360 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 LCLAT1Q6UWP7 414 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 CXCL17Q6UXB2 119 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 EMC1Q8N766 993 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 LRRC52Q8N7C0 313 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 UBLCP1Q8WVY7 318 aaPredicted RBP19.38■□□□□ 0.69
CCDC43-201ENST00000315286 SLITRK1Q96PX8 696 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 METTL5Q9NRN9 209 aaKnown RBP19.38■□□□□ 0.69
CCDC43-201ENST00000315286 PARP2Q9UGN5 583 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 TSPAN16Q9UKR8 245 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 UBQLN1Q9UMX0 589 aaKnown RBP19.38■□□□□ 0.69
CCDC43-201ENST00000315286 NFS1Q9Y697 457 aa19.38■□□□□ 0.69
CCDC43-201ENST00000315286 PPFIA2O75334 1257 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 PGK1P00558 417 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 KRT1P04264 644 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 KRT10P13645 584 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 FCGRTP55899 365 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 KRT17Q04695 432 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 ADCY2Q08462 1091 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 MFSD7Q6UXD7 560 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 ARFGAP1Q8N6T3 406 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 ACSF2Q96CM8 615 aaPredicted RBP19.37■□□□□ 0.69
CCDC43-201ENST00000315286 MCRS1Q96EZ8 462 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 FAM118BQ9BPY3 351 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 MTG1Q9BT17 334 aaPredicted RBP19.37■□□□□ 0.69
CCDC43-201ENST00000315286 ATP8A1Q9Y2Q0 1164 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 KPNA6O60684 536 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 LMAN1P49257 510 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 MTMR3Q13615 1198 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 ACOT1Q86TX2 421 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 OR2W6PQ8NHA6 318 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 FNIP1Q8TF40 1166 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 RAPGEF5Q92565 580 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 RBM41Q96IZ5 413 aaKnown RBP19.37■□□□□ 0.69
CCDC43-201ENST00000315286 SCN10AQ9Y5Y9 1956 aa19.37■□□□□ 0.69
CCDC43-201ENST00000315286 PIRO00625 290 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 PFKMP08237 780 aa19.36■□□□□ 0.69
CCDC43-201ENST00000315286 GBP1P32455 592 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms