RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 EFHD1Q9BUP0 239 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 CRLS1Q9UJA2 301 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 E2F8A0AVK6 867 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 CCDC151A5D8V7 595 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 PBLDP30039 288 aaPredicted RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 OOSP2Q86WS3 158 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 NFKBIZQ9BYH8 718 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 C20orf96Q9NUD7 363 aaPredicted RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 CAMTA1Q9Y6Y1 1673 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 TLL1O43897 1013 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 ZNF500O60304 480 aaPredicted RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 LGALS2P05162 132 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 ARHGDIAP52565 204 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 NFE2Q16621 373 aaPredicted RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 MOXD1Q6UVY6 613 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 PPARGC1AQ9UBK2 798 aaKnown RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 CDY2AQ9Y6F7 541 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 BCAT1P54687 386 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 GIT2Q14161 759 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 CERS5Q8N5B7 392 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 ZCWPW1Q9H0M4 648 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 ARHGAP23Q9P227 1491 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 AFDNP55196 1824 aaKnown RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 TSPAN3O60637 253 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 XYLBO75191 536 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 MYL6P60660 151 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 LCA5Q86VQ0 697 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 PDCD7Q8N8D1 485 aaKnown RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 MKNK1Q9BUB5 465 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 MRPL9Q9BYD2 267 aaKnown RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 GOLGA8RI6L899 631 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 AP3B1O00203 1094 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 ZNF263O14978 683 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 SPAG7O75391 227 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 CHRM3P20309 590 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 SEC23AQ15436 765 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 SNX31Q8N9S9 440 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 ATL2Q8NHH9 583 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 BLOC1S5Q8TDH9 187 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 STN1Q9H668 368 aaKnown RBP14.1□□□□□ -0.15
RFFL-201ENST00000315249 PCDHB5Q9Y5E4 795 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 ESRRAP11474 423 aaPredicted RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 APOBEC2Q9Y235 224 aaKnown RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 SLURP2P0DP57 97 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 PHEXP78562 749 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 WASHC5Q12768 1159 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 RBM23Q86U06 439 aaKnown RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 MRPL46Q9H2W6 279 aaKnown RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 PLD1Q13393 1074 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 TREML2Q5T2D2 321 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 PITPNM3Q9BZ71 974 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 CNOT10Q9H9A5 744 aaKnown RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 CTIFO43310 598 aaKnown RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 CST8O60676 142 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 NECAB2Q7Z6G3 386 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 ZNF541Q9H0D2 1346 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 CABYRO75952 493 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 ALDH1A2O94788 518 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 PSMC6P62333 389 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 MORF4L2Q15014 288 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 ALS2CLQ60I27 953 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 SLC27A1Q6PCB7 646 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 FAM47EQ6ZV65 393 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 TFB1MQ8WVM0 346 aaKnown RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 EDEM1Q92611 657 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 Q9H521 79 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 ZNF189O75820 626 aaPredicted RBP14.09□□□□□ -0.15
RFFL-201ENST00000315249 NR1D1P20393 614 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 HIPK4Q8NE63 616 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 GAD1Q99259 594 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 KDM4CQ9H3R0 1056 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 CD274Q9NZQ7 290 aa14.09□□□□□ -0.15
RFFL-201ENST00000315249 SPDYE5A6NIY4 337 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 FAM86B1E9PN63 330 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 MMEP08473 750 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 FAM86B2P0C5J1 330 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 VDRP11473 427 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 SPDYE7PQ495Y7 208 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 NUDCD3Q8IVD9 361 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 ELMO3Q96BJ8 720 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 APBA2Q99767 749 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 TAF1DQ9H5J8 278 aaPredicted RBP14.08□□□□□ -0.15
RFFL-201ENST00000315249 TRIM45Q9H8W5 580 aaPredicted RBP14.08□□□□□ -0.15
RFFL-201ENST00000315249 ABCB6Q9NP58 842 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 ZDHHC9Q9Y397 364 aa14.08□□□□□ -0.15
RFFL-201ENST00000315249 SLC15A5A6NIM6 579 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 CBX4O00257 560 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 CASP7P55210 303 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 FKBP1BP68106 108 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 LAMB3Q13751 1172 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 ZSCAN26Q16670 478 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 MIPOL1Q8TD10 442 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.16
RFFL-201ENST00000315249 RHOCP08134 193 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 GARTP22102 1010 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 STARD3Q14849 445 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 CELF3Q5SZQ8 465 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms