RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 LINC01465Q8N7H1 131 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 MDM1Q8TC05 714 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 EPS8L3Q8TE67 593 aaKnown RBP15.39■□□□□ 0.05
SMG8-201ENST00000300917 TMEM176AQ96HP8 235 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 PARP2Q9UGN5 583 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 DNPEPQ9ULA0 475 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 CD48P09326 243 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 CCT5P48643 541 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 SYCP2LQ5T4T6 812 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 CHADLQ6NUI6 762 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
SMG8-201ENST00000300917 LRRN4Q8WUT4 740 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 KCNN1Q92952 543 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 LRRC19Q9H756 370 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 KAT6AQ92794 2004 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 A0A1B0GUA9 196 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 MAP3K6O95382 1288 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 HOXA11P31270 313 aaPredicted RBP15.39■□□□□ 0.05
SMG8-201ENST00000300917 ADCY1Q08828 1119 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 MTMR3Q13615 1198 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 FAM102AQ5T9C2 384 aaPredicted RBP15.39■□□□□ 0.05
SMG8-201ENST00000300917 OR6B2Q6IFH4 312 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 VCPIP1Q96JH7 1222 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 MRPL45Q9BRJ2 306 aaKnown RBP15.39■□□□□ 0.05
SMG8-201ENST00000300917 ADAM33Q9BZ11 813 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 EPB41L4BQ9H329 900 aa15.39■□□□□ 0.05
SMG8-201ENST00000300917 ATF2P15336 505 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 IL1R2P27930 398 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 NRLP54845 237 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 ATP11AP98196 1134 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 CLUL1Q15846 466 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 KAT2BQ92831 832 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 MRRFQ96E11 262 aaKnown RBP15.38■□□□□ 0.05
SMG8-201ENST00000300917 MIS12Q9H081 205 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 PPFIA2O75334 1257 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 CILPO75339 1184 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 FNTAP49354 379 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 YARSP54577 528 aaKnown RBP15.38■□□□□ 0.05
SMG8-201ENST00000300917 YWHAEP62258 255 aaKnown RBP15.38■□□□□ 0.05
SMG8-201ENST00000300917 CYP1B1Q16678 543 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 CCDC142Q17RM4 750 aa15.38■□□□□ 0.05
SMG8-201ENST00000300917 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMG8-201ENST00000300917 RBM47A0AV96 593 aaKnown RBP15.37■□□□□ 0.05
SMG8-201ENST00000300917 GOLGA8MH3BSY2 632 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 PSTPIP1O43586 416 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 GAS8O95995 478 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 CYP3A5P20815 502 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 EIF4BP23588 611 aaKnown RBP15.37■□□□□ 0.05
SMG8-201ENST00000300917 KYNUQ16719 465 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 C15orf59Q2T9L4 293 aaPredicted RBP15.37■□□□□ 0.05
SMG8-201ENST00000300917 IQSEC1Q6DN90 963 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 OR6B3Q8NGW1 331 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 SLITRK1Q96PX8 696 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 SELENOSQ9BQE4 189 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 CALN1Q9BXU9 219 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 GCOM2Q9BZD3 368 aaPredicted RBP15.37■□□□□ 0.05
SMG8-201ENST00000300917 GJD2Q9UKL4 321 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 TSPAN16Q9UKR8 245 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 MGAMO43451 1857 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 RECQL4O94761 1208 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 IFI35P80217 286 aaPredicted RBP15.37■□□□□ 0.05
SMG8-201ENST00000300917 RBP5P82980 135 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 LONRF1Q17RB8 773 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 SCYL2Q6P3W7 929 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 ARFGAP1Q8N6T3 406 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 C3orf20Q8ND61 904 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 CXorf38Q8TB03 319 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 C9orf72Q96LT7 481 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 TMEM121Q9BTD3 319 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 BCO2Q9BYV7 579 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 PABPC3Q9H361 631 aaKnown RBP15.37■□□□□ 0.05
SMG8-201ENST00000300917 ANAPC5Q9UJX4 755 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 VGLL3A8MV65 326 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 E5RJQ4 531 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 LSM8O95777 96 aaKnown RBP15.37■□□□□ 0.05
SMG8-201ENST00000300917 CTSHP09668 335 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 MFSD10Q14728 455 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 ZNF618Q5T7W0 954 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 CYP4F22Q6NT55 531 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 KATNAL2Q8IYT4 538 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 ASB7Q9H672 318 aa15.37■□□□□ 0.05
SMG8-201ENST00000300917 MED7O43513 233 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 C6orf222P0C671 652 aaPredicted RBP15.36■□□□□ 0.05
SMG8-201ENST00000300917 IGFBP6P24592 240 aaPredicted RBP15.36■□□□□ 0.05
SMG8-201ENST00000300917 MAP2K5Q13163 448 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 KLF1Q13351 362 aaPredicted RBP15.36■□□□□ 0.05
SMG8-201ENST00000300917 SPOCD1Q6ZMY3 1216 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 XYLT1Q86Y38 959 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 CCDC33Q8N5R6 958 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 ATL2Q8NHH9 583 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 EXD1Q8NHP7 514 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMG8-201ENST00000300917 B3GNT5Q9BYG0 378 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 DPEP3Q9H4B8 488 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 GPATCH2LQ9NWQ4 482 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 LCMT1Q9UIC8 334 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 GRIN2DO15399 1336 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 LRCH4O75427 683 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms