RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 MAGEC1O60732 1142 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 PGM3O95394 542 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 CFHP08603 1231 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 PHBP35232 272 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 MAP7Q14244 749 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 MORF4L2Q15014 288 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 TRMT5Q32P41 509 aaKnown RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 FNBP1LQ5T0N5 605 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 RNASEH2BQ5TBB1 312 aaKnown RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 PRPF39Q86UA1 669 aaKnown RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 NME8Q8N427 588 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 CHMP2BQ9UQN3 213 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 GAKO14976 1311 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 F8W8V4 182 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 TLR3O15455 904 aaKnown RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 UNGP13051 313 aaPredicted RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 DYNLT1P63172 113 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 PRKD1Q15139 912 aaPredicted RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 SFT2D3Q587I9 215 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 FAM182AQ5T1J6 154 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 ANKRD22Q5VYY1 191 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 ARID3BQ8IVW6 561 aaPredicted RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 ALLCQ8N6M5 410 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 OR6Y1Q8NGX8 325 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 RILPQ96NA2 401 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 MECRQ9BV79 373 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 STRA6Q9BX79 667 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 RAB20Q9NX57 234 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 SAE1Q9UBE0 346 aaPredicted RBP13.67□□□□□ -0.22
TVP23A-201ENST00000299866 ACTR3P61158 418 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 SNRNP35Q16560 246 aaKnown RBP13.66□□□□□ -0.22
TVP23A-201ENST00000299866 ADGRD1Q6QNK2 874 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 HAUS6Q7Z4H7 955 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 KATNAL2Q8IYT4 538 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.66□□□□□ -0.22
TVP23A-201ENST00000299866 ATP11CQ8NB49 1132 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 EXD1Q8NHP7 514 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.66□□□□□ -0.22
TVP23A-201ENST00000299866 SERAC1Q96JX3 654 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 TMCO1Q9UM00 188 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 PSTPIP1O43586 416 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 TM7SF2O76062 418 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 HLA-DOAP06340 250 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 ARP10275 920 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 TCP10Q12799 353 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 ALCAMQ13740 583 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 MYBPC2Q14324 1141 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 SYCP2LQ5T4T6 812 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 LARGE2Q8N3Y3 721 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 FBXL13Q8NEE6 735 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 FAM81BQ96LP2 452 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 GPRC5CQ9NQ84 441 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
TVP23A-201ENST00000299866 IL1RAPL1Q9NZN1 696 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 IKBKGQ9Y6K9 419 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 CACNB3P54284 484 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 PEX3P56589 373 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 LIN9Q5TKA1 542 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 SLC26A7Q8TE54 656 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 MIS12Q9H081 205 aa13.66□□□□□ -0.22
TVP23A-201ENST00000299866 SSU72Q9NP77 194 aaKnown RBP13.66□□□□□ -0.22
TVP23A-201ENST00000299866 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.66□□□□□ -0.22
TVP23A-201ENST00000299866 MYPNQ86TC9 1320 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 TMEM150BA6NC51 233 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 RIMBP2O15034 1052 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 ZNF862O60290 1169 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 FAAP100Q0VG06 881 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 ASPHQ12797 758 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 DCAKDQ8WVC6 231 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 JDP2Q8WYK2 163 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 ACAP3Q96P50 834 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 IQCGQ9H095 443 aaKnown RBP13.65□□□□□ -0.22
TVP23A-201ENST00000299866 PDLIM1O00151 329 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 DSG3P32926 999 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 HIRAP54198 1017 aaPredicted RBP13.65□□□□□ -0.22
TVP23A-201ENST00000299866 EPHB1P54762 984 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 NFIAQ12857 509 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 DLG1Q12959 904 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 PTK7Q13308 1070 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 TTLL12Q14166 644 aaPredicted RBP13.65□□□□□ -0.22
TVP23A-201ENST00000299866 KLHL38Q2WGJ6 581 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 LMBRD2Q68DH5 695 aaPredicted RBP13.65□□□□□ -0.22
TVP23A-201ENST00000299866 ACAD11Q709F0 780 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 DCAF4Q8WV16 495 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 USP6NLQ92738 828 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 KIFC3Q9BVG8 833 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 DDX18Q9NVP1 670 aaKnown RBP13.65□□□□□ -0.22
TVP23A-201ENST00000299866 GGA1Q9UJY5 639 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 TAF1LQ8IZX4 1826 aa13.65□□□□□ -0.22
TVP23A-201ENST00000299866 PRR5-ARHGAP8B1AHC4 643 aa13.65□□□□□ -0.23
TVP23A-201ENST00000299866 BUD23O43709 281 aaKnown RBP13.65□□□□□ -0.23
TVP23A-201ENST00000299866 TGDSO95455 350 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms